Pairwise Alignments

Query, 361 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2E3

Subject, 348 a.a., nitrogen regulation protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  300 bits (769), Expect = 3e-86
 Identities = 164/347 (47%), Positives = 226/347 (65%), Gaps = 5/347 (1%)

Query: 11  LLDNLTTATILLNADLRLEYMNPAAEMLLAISGQRSHGQFISELFTESTEALNSLRQAVE 70
           LL++L TA +++++ L+  + N AAE LL     R   Q ++++F         L  AV 
Sbjct: 6   LLNHLVTAVLVIDSGLKPCFANAAAEQLLGTGSHRLSEQALTDIFQLQEVPATILADAVR 65

Query: 71  QAHPFTKREAMLTALTGQTLTVDYAVTPILSNGDTLLLLEVHPRDRLLRITKEEAQLSKQ 130
           Q    T   A L    GQ  TVD  + P L N   L LLE+   D+  RI ++  Q ++Q
Sbjct: 66  QGLGLTVNTASLVTFDGQHHTVDLTLIP-LENEPGLSLLELRQVDQQRRIHQQLTQDAQQ 124

Query: 131 ETSKMLVRGLAHEIKNPLGGIRGAAQLLARELPEESLKDYTNVIIEEADRLRNLVDRMLG 190
           + ++ LVR LAHEIKNPLGG+RGAAQLL+REL +ESLK++T +IIE+ADR+R LVD++LG
Sbjct: 125 QAAQFLVRNLAHEIKNPLGGLRGAAQLLSRELEDESLKEFTTLIIEQADRMRALVDKLLG 184

Query: 191 SNKLPSLALCNVHEVLERVCHLVEAESQGCITLVRDYDPSIPDVLIDREQMIQAVLNIVR 250
             K  +    N+HEV E+V  LVE  +   I ++RDYDPSIPD+ +D +QM QA+LNIV+
Sbjct: 185 PQKPTAHLPHNIHEVAEKVIKLVELSTPANIRVIRDYDPSIPDIDLDADQMQQALLNIVQ 244

Query: 251 NAMQAISTQNELRLGRITLRSRAMRQFTIGHVRHRLVTKLEIIDNGPGIPADLQETIFFP 310
           NA+QA+        G IT+R+R   Q TIG  RH+LV  L +ID+GPGIP +L +T+F+P
Sbjct: 245 NAVQALENSG----GTITVRTRTSHQVTIGAQRHKLVLMLSVIDDGPGIPPELMDTLFYP 300

Query: 311 MVSGRPDGTGLGLAITQNIISQHQGLIECDSHPGHTTFSIFLPLEQG 357
           MV+GR  G+GLGL+I  NI   H G I+CDS PGHT F + LP++ G
Sbjct: 301 MVTGREQGSGLGLSIAHNIARLHGGRIDCDSAPGHTQFVLTLPIKTG 347