Pairwise Alignments

Query, 361 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2E3

Subject, 357 a.a., signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  166 bits (421), Expect = 7e-46
 Identities = 98/262 (37%), Positives = 153/262 (58%), Gaps = 8/262 (3%)

Query: 96  VTPILSNGDTLLLLEVHPRDRLLRITKEEAQLSKQETSKMLVRGLAHEIKNPLGGIRGAA 155
           V+P++ N + +LLL + PR+   R+ +     S  +++  +   LAHEIKNPL GI GAA
Sbjct: 93  VSPLVDNPELVLLL-LEPREIAGRLGRSMQSQSAAKSAIGMAEMLAHEIKNPLAGITGAA 151

Query: 156 QLLARELPEESLKDYTNVIIEEADRLRNLVDRM--LGSNKLPSLALCNVHEVLERVCHLV 213
           QLL   L  E  ++ T++I+ E+ R+  L++++   G+ + P L   N+H+VLER     
Sbjct: 152 QLLGMNLSNED-RELTDLIVAESHRIVKLLEQVEQFGNLRPPDLRPVNIHDVLERARRSA 210

Query: 214 EAESQGCITLVRDYDPSIPDVLIDREQMIQAVLNIVRNAMQAISTQNELRLGRI-TLRSR 272
                  +T+  DYDPS+P+   D +Q++Q  LN+++NA +A      +R+     L  R
Sbjct: 211 VVGFGAHVTIREDYDPSLPNTYADGDQLLQVFLNLLKNAAEACKPGGTIRIRTFYELSLR 270

Query: 273 AMRQFTIGHVRHRLVTKLEIIDNGPGIPADLQETIFFPMVSGRPDGTGLGLAITQNIISQ 332
             R+   G     +  ++EI+D+GPG+P +++  +F P VSGR +GTGLGLA+   IIS 
Sbjct: 271 LRRKDGSGGT---VPLQIEIMDDGPGLPPEIESDVFEPFVSGRENGTGLGLALVSKIISD 327

Query: 333 HQGLIECDSHPGHTTFSIFLPL 354
           H G I  DS PG T F I LP+
Sbjct: 328 HDGWIAVDSVPGRTVFRISLPV 349