Pairwise Alignments

Query, 230 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

Subject, 235 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  162 bits (409), Expect = 7e-45
 Identities = 91/209 (43%), Positives = 126/209 (60%), Gaps = 8/209 (3%)

Query: 16  SALLIAGVLLGGLHA----DWDFSLISRRAETLYGPLGEGKQRIDAWQHLLAAQKQTPEP 71
           S L+++ + +  L+A      D + I+   E  YG       R  AW  +LA      E 
Sbjct: 17  SCLVVSALGISCLYAAPTQKLDEAKITSTLEKRYGE--RAGMRARAWFKVLAEASTVDEK 74

Query: 72  EQLNVVNLFFNKQMHYVEDIDLWHVEDYWATPIEALWKGAGDCEDYAIAKYFSLRHLGVS 131
           E+L  VN FFN    +V+DI LW   +YWATP+E +    GDCED++IAKYF+L  LGV 
Sbjct: 75  EKLLKVNNFFNL-FRFVDDIKLWGESNYWATPMEFIGVNGGDCEDFSIAKYFTLLELGVP 133

Query: 132 SDKLRITYVKALRQNRAHMVLTYYSSPDAMPLVLDSLMDAIQPASQRTDLLPVYSFNAEG 191
            DK+RIT VKA   N+ HMVL YY +P ++PLVLD+L   I+PA+QR DL+PVYSFN + 
Sbjct: 134 EDKMRITMVKATSVNQYHMVLAYYDTPASIPLVLDNLDHVIKPATQRKDLIPVYSFNGKQ 193

Query: 192 LWLPGAKGNKKV-GDTKRLSRWQDVLKKM 219
           LWL   +G   + G + RL +W D+  ++
Sbjct: 194 LWLNKEQGRGVLAGSSTRLEKWNDLTHRL 222