Pairwise Alignments

Query, 923 a.a., DNA polymerase I from Pseudomonas fluorescens FW300-N2E3

Subject, 924 a.a., DNA polymerase A (NCBI) from Rhodospirillum rubrum S1H

 Score =  661 bits (1705), Expect = 0.0
 Identities = 404/939 (43%), Positives = 549/939 (58%), Gaps = 42/939 (4%)

Query: 6   LVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFDAKGGT 65
           L LVDGS Y++RA+H+LPP+T + G P  AV G   ML  L         AV+FD    +
Sbjct: 7   LYLVDGSGYIFRAYHSLPPMTRTDGTPVNAVYGFTAMLMKLLADMDADHLAVIFDKARVS 66

Query: 66  FRDDLYAEYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVDGVEADDVIGTLARSSAAA 125
           FR+++Y  YKA RP  P+D+  Q   +  +V A   P +  DG EADD+I T A+ + A 
Sbjct: 67  FRNEIYPLYKAQRPPPPEDLIPQFPLIREAVRAFNVPCIERDGFEADDLIATYAKRARAE 126

Query: 126 DRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDVAGVKEKFGVAPEQIIDYLALMGDSSD 185
              V + + DKD+ QLV   + L + M   A+  A V EKFGVAP+++ID  AL GD+ D
Sbjct: 127 GAIVTVVSSDKDLMQLVGEGVALFDPMKNRAIGPAEVFEKFGVAPDKVIDVQALAGDAVD 186

Query: 186 NIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVPTLPIRGAKTLPAKLEEHKEMAFLSY 245
           N+PGVPGIG KTA+ L +G  G L  L A+        I+  K   + L+ H E A +S 
Sbjct: 187 NVPGVPGIGVKTAAQL-IGEYGDLETLLAR-----AAEIKQPKRRQSLLD-HAEAARISL 239

Query: 246 QLATIKVDVPLDVGLDDLHLREPDREKLAELYTLLEFKSWFEEVQRDAK-RAGQEVVAAV 304
           QL  ++ DV +   L D    EPD E LA       F+S    V   A  +AG     A 
Sbjct: 240 QLVRLRDDVEVSETLADFATAEPDAEVLAGFLAENGFRSLLARVTAVAHAKAGTTPQPAA 299

Query: 305 EEAVADSDGPHYTTVLTQADFDVWLKKLQNATLFAFDTETTGIDAQQAQLVGLSFAVQAN 364
             A AD D   Y  V T A+  VW+ K + A L A DTET  + A++A LVG+S A+   
Sbjct: 300 --APADDD---YVLVNTLAELGVWIAKARAAGLVAIDTETDSLKARRATLVGVSLAITPG 354

Query: 365 EAAYIPLTHSYMG------------VPDQLDRDTVLRALKPILEDPSKLKVGQHAKFDMN 412
            A YIP  H                V +  D+   L  L  +L DP  LKVG + KFD++
Sbjct: 355 RACYIPFAHGLRKAEGLDFDGAAPPVANIEDKAAALALLGDLLRDPGVLKVGHNLKFDLH 414

Query: 413 ILANCAIGGDQSCGIMVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGYTTTSFQDIAG 472
           +LAN         G+       DTM+ SYVLD T   H MD LA  +LG  T +F+++ G
Sbjct: 415 VLANA--------GLSDVAPVDDTMVLSYVLDGTLHGHGMDELAGLHLGRRTITFEEVCG 466

Query: 473 KGVKQLTFDQISLELAGPYAAEDADVTLRLHQTLHEKLDAIPSLSKVLSEIEMPLVPVLA 532
           KG  Q+TFDQ+ L+ A  YAAEDADVTLRL+  L ++L     + +V   ++ P+V +L 
Sbjct: 467 KGKGQITFDQVPLDKAVAYAAEDADVTLRLYLLLRDRL-LKEHMVRVHETLDRPMVRILT 525

Query: 533 RIERQGALVDANLLGIQSVELGDKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPI 592
            +E  G  VDA  L   S +   ++  LE +  A+AG  FN+ SPKQLG +L+E++ L  
Sbjct: 526 DMEAAGVRVDALRLKALSGDFAKRMGDLEDQIHALAGHAFNVASPKQLGEVLFEEMSLTG 585

Query: 593 LSKTAK-GQASTAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINPRTGRIH 651
             K+ K G  ST   VL +LA + + LP  ++ +R  +KLK TYTD L  +I+ RTGR+H
Sbjct: 586 GKKSRKTGAWSTDAQVLDQLAAEGHDLPARVLDWRQYAKLKGTYTDALVAEIDERTGRVH 645

Query: 652 TSYHQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFIAPKGYKLLAADYSQIELRIMAH 711
           T+Y   V ATGRLSS+DPNLQNIP+R+  GR+IR+AFIA  G+ L++ADYSQIELR++AH
Sbjct: 646 TTYGLTVTATGRLSSNDPNLQNIPVRSEAGRKIREAFIAAPGHLLISADYSQIELRLVAH 705

Query: 712 LAKDEGLLHAFRNDLDVHKATAAEVFGVELADVTTDQRRSAKAINFGLIYGMSAFGLAKQ 771
           +A    L  AF    D+H  TA++VFGV +  +    RR AKAINFG+IYG+SA GLA+Q
Sbjct: 706 VAGITALRQAFAEGKDIHAITASQVFGVPVEGMDPMVRRQAKAINFGIIYGISAHGLAQQ 765

Query: 772 IGVDRKQSQAYIDRYFARYPGVLEYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPALR 831
           +GV R ++ A+I  YFAR+P +  YME  + +A   G+V T FGRR+ +P I  KNPA R
Sbjct: 766 LGVGRPEAAAFITAYFARFPEIRSYMETVKEEARTVGWVATPFGRRIPIPGIQDKNPAAR 825

Query: 832 KGAERTAINAPMQGTAADIIKKAMVAVDNWLLTSGLDAKVILQVHDELVLEVREDLIDQV 891
             AER AINAP+QG AADIIK+AM+A+   L  +GL  +++LQVHDEL+ E  E   +  
Sbjct: 826 AFAERQAINAPIQGGAADIIKRAMIALPPALEQAGLATRMLLQVHDELIFEAPEAEAETA 885

Query: 892 REEIRVHMSSAATL-------DVPLLVEVGVGNNWDEAH 923
              ++  M +A TL        VPL V+ G+  +W EAH
Sbjct: 886 AALVKRVMETAVTLTDDQGERTVPLEVDTGIAASWAEAH 924