Pairwise Alignments

Query, 923 a.a., DNA polymerase I from Pseudomonas fluorescens FW300-N2E3

Subject, 904 a.a., Probable DNA polymerase I PolA from Mycobacterium tuberculosis H37Rv

 Score =  497 bits (1280), Expect = e-144
 Identities = 337/934 (36%), Positives = 504/934 (53%), Gaps = 65/934 (6%)

Query: 6   LVLVDGSSYLYRAFHALPP--LTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFDAKG 63
           L+L+DG+S  +RAF+ALP     T  GL T AV G   ML +L +    +  A  FD   
Sbjct: 17  LMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDVSR 76

Query: 64  GTFRDDLYAEYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVDGVEADDVIGTLARSSA 123
            TFR   Y EYKANR S PD+   QI+     + ALG  +L   G EADD+I TLA  + 
Sbjct: 77  QTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQAE 136

Query: 124 AADRPVVISTGDKDMAQLVDGHITLVNTMTG----SAMDVAGVKEKFGVAPEQIIDYLAL 179
                V++ TGD+D  QLV   +T++    G    +      V EK+G+ P Q  D+ AL
Sbjct: 137 NEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFAAL 196

Query: 180 MGDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVPTLPIRGAKTLPAKLEEHKE 239
            GD SDN+PG+PG+G KTA+  +    G L  L   +D V     RG   +   L  +  
Sbjct: 197 RGDPSDNLPGIPGVGEKTAAKWIAEY-GSLRSLVDNVDAV-----RGK--VGDALRANLA 248

Query: 240 MAFLSYQLATIKVDVPLDVGLDDLHLREPDREKLAELYTLLEFKSWFEEVQRDAKRAGQE 299
               + +L  +  DVPL    D L L+  DR+ +  L+  LEF+     V RD       
Sbjct: 249 SVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFR-----VLRDR------ 297

Query: 300 VVAAVEEAVADSDGPHYTTVLTQADFDVWLKKLQNATLFAFDTETTGIDAQQAQLVGLSF 359
               + + +A + GP          FDV    L   T+  +  E  G D ++A L  +  
Sbjct: 298 ----LFDTLAAAGGPE-----VDEGFDVRGGALAPGTVRQWLAEHAG-DGRRAGLTVVGT 347

Query: 360 AVQANEAAYIPLTHSYMGVPDQLDRDTVL----RALKPILEDPSKLKVGQHAKFDMNILA 415
            +     A      +  G    LD  T+      AL   L DP+K K    AK  ++ LA
Sbjct: 348 HLPHGGDATAMAVAAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLA 407

Query: 416 NCAIGGDQSCGIMVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGYTTTSFQDIAGKGV 475
                     G  ++G+  DT L +Y++        +D L+L+YL       +++  +  
Sbjct: 408 GR--------GWTLEGVTSDTALAAYLVRPGQRSFTLDDLSLRYLR------RELRAETP 453

Query: 476 KQLTFDQISLELAGPYAAEDADVTLRLHQTLHEKLDAIPS------LSKVLSEIEMPLVP 529
           +Q    Q+SL       AE    T+   + + +  DA+ +       + +L E+E+P+  
Sbjct: 454 QQ---QQLSLLDDDDTDAETIQTTILRARAVIDLADALDAELARIDSTALLGEMELPVQR 510

Query: 530 VLARIERQGALVDANLLGIQSVELGDKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLG 589
           VLA++E  G  VD  +L     + GD++      A+ + G++ NLGSPKQL V+L+++LG
Sbjct: 511 VLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQINLGSPKQLQVVLFDELG 570

Query: 590 LPILSKTAKGQASTAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINPRTGR 649
           +P   +T  G  + A+A+ +   +  +P  + L+ +R +++LK T    L  Q     GR
Sbjct: 571 MPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRLKVTVDGLL--QAVAADGR 628

Query: 650 IHTSYHQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFIAPKGY-KLLAADYSQIELRI 708
           IHT+++Q +AATGRLSS++PNLQNIPIRT  GRRIR AF+   GY +L+ ADYSQIE+RI
Sbjct: 629 IHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDGYAELMTADYSQIEMRI 688

Query: 709 MAHLAKDEGLLHAFRNDLDVHKATAAEVFGVELADVTTDQRRSAKAINFGLIYGMSAFGL 768
           MAHL+ DEGL+ AF    D+H   A+  FGV + +VT + RR  KA+++GL YG+SA+GL
Sbjct: 689 MAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRVKAMSYGLAYGLSAYGL 748

Query: 769 AKQIGVDRKQSQAYIDRYFARYPGVLEYMERTRAQAAEQGFVETIFGRRLYLPDINAKNP 828
           ++Q+ +  +++   +D YFAR+ GV +Y+     +A + G+  T+ GRR YLP++++ N 
Sbjct: 749 SQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTSTVLGRRRYLPELDSSNR 808

Query: 829 ALRKGAERTAINAPMQGTAADIIKKAMVAVDNWLLTSGLDAKVILQVHDELVLEVREDLI 888
            +R+ AER A+NAP+QG+AADIIK AM+ VD  L  + L ++++LQVHDEL+ E+     
Sbjct: 809 QVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRMLLQVHDELLFEIAPGER 868

Query: 889 DQVREEIRVHMSSAATLDVPLLVEVGVGNNWDEA 922
           ++V   +R  M  A  LDVPL V VG G +WD A
Sbjct: 869 ERVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAA 902