Pairwise Alignments

Query, 531 a.a., cytochrome oxidase subunit I from Pseudomonas fluorescens FW300-N2E3

Subject, 530 a.a., cytochrome c oxidase, subunit I (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  897 bits (2317), Expect = 0.0
 Identities = 411/518 (79%), Positives = 465/518 (89%)

Query: 14  DDHVHGPAKGLMRWVLTTNHKDIGTLYLWFSFMMFLLGGSFAMVIRAELFQPGLQIVEPA 73
           D+H HG  KG+MRW+LTTNHKDIGTLYLWFSF+MFL GG+ AMVIRAELFQPGLQ+VEP 
Sbjct: 13  DEHHHGAPKGIMRWILTTNHKDIGTLYLWFSFIMFLTGGAMAMVIRAELFQPGLQLVEPN 72

Query: 74  FFNQMTTMHGLVMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLV 133
           FFNQMTT+HGL+MVFGAVMPAF GLANW+IP+MIGAPDMALPRMNN+SFW+LP AF +L+
Sbjct: 73  FFNQMTTVHGLIMVFGAVMPAFTGLANWLIPMMIGAPDMALPRMNNWSFWILPFAFTILL 132

Query: 134 STLFMPGGGPNFGWTFYAPLSTTYAPESVTFFIFAIHLMGISSIMGAINVIATILNLRAP 193
           S+LFM GGGPNFGWTFYAPLSTTY+P+S   F+F+IH+MGISSIMGAINVI TI+NLRAP
Sbjct: 133 SSLFMEGGGPNFGWTFYAPLSTTYSPDSTALFVFSIHIMGISSIMGAINVIVTIVNLRAP 192

Query: 194 GMTLMKMPLFVWTWLITAFLLIAVMPVLAGCVTMMLMDIHFGTSFFSAAGGGDPVLFQHV 253
           GMT MK+PLFVWTWLITAFLLIAVMPVLAG VTM+L D  FGTSFF AAGGGDPV+FQH+
Sbjct: 193 GMTWMKLPLFVWTWLITAFLLIAVMPVLAGAVTMVLTDKFFGTSFFEAAGGGDPVMFQHI 252

Query: 254 FWFFGHPEVYIMILPAFGAVSSIIPTFSRKPLFGYTSMVYATASIAFLSFIVWAHHMFVV 313
           FWFFGHPEVYIMILP+FG +S+I+P FSRKPLFGY SMVYATASIA LSF+VWAHHMF  
Sbjct: 253 FWFFGHPEVYIMILPSFGIISAIVPAFSRKPLFGYASMVYATASIAILSFLVWAHHMFTT 312

Query: 314 GIPLVGELFFMYATLLIAVPTGVKVFNWVSTMWQGSLTFETPMLFAVAFVILFSIGGFSG 373
           G+P+  ELFFMY T+LIAVPTGVKVFNWV+TMW+GSL+FETPMLFAVAF+ILF+IGGFSG
Sbjct: 313 GMPVFAELFFMYCTMLIAVPTGVKVFNWVATMWRGSLSFETPMLFAVAFIILFTIGGFSG 372

Query: 374 LMLAIAPADFQYQDTYFVVAHFHYVLVPGAIFGIFASAYYWMPKWTGHMYDETLGKLHFW 433
           LMLAI PADFQY DTYFVVAHFHYVLV GAIF I A+AYYW+PKWTGHMY E LG+ HFW
Sbjct: 373 LMLAITPADFQYHDTYFVVAHFHYVLVTGAIFSIMAAAYYWLPKWTGHMYSERLGQWHFW 432

Query: 434 LSFIGMNMAFFPMHFVGLAGMPRRIPDYNLQFADFNMVSSIGAFTFGATQIFFLFIVIKT 493
            S I +N+ FFPMHF+GLAGMPRRIPDY++QFAD N + SIG F FG +Q+ FL +VIK 
Sbjct: 433 CSVISVNVLFFPMHFLGLAGMPRRIPDYSIQFADVNQIVSIGGFAFGLSQLIFLVLVIKC 492

Query: 494 IRGGPAAPAKPWEGAEGLEWSVPSPAPYHTFVTPPEVK 531
           IRGG  APAKPWEG+EGLEW++PSPAPYH+F TPPEVK
Sbjct: 493 IRGGEKAPAKPWEGSEGLEWTLPSPAPYHSFTTPPEVK 530