Pairwise Alignments

Query, 683 a.a., oligopeptidase A from Pseudomonas fluorescens FW300-N2E3

Subject, 726 a.a., peptidyl-dipeptidase Dcp (RefSeq) from Shewanella loihica PV-4

 Score =  378 bits (971), Expect = e-109
 Identities = 228/684 (33%), Positives = 361/684 (52%), Gaps = 15/684 (2%)

Query: 2   SVNNPLLQPYD----LPPFSAIRAEHVQPAIEQILADNRAAIAEILKTQGKQPTWAGLVL 57
           + +NP  +PYD    +P F  I+ EH  PA +  +A ++A I  I+      PT+A  + 
Sbjct: 47  NASNPFFKPYDTFLGMPDFDKIKPEHYLPAFKAGIAQHKAEIQAIIDNPAA-PTFANTIE 105

Query: 58  AMDELNDRLGAAWSPVSHLNAVCNSAELREAYESCLPALSAYATEMGQNRELFQAYEALV 117
           AM+   D      S   +L +   + +L+   +   P LSA   ++  N +LF+  +A+ 
Sbjct: 106 AMEFAGDLTTKVASVFYNLTSADTNEQLQAISKEVSPMLSAAGDDILLNDQLFKRVKAVY 165

Query: 118 NSPEAAGFDVAQKTILEHALRDFRLSGIDLPAAEQKRYAEVQSKLSELGSHFSNQLLDAT 177
           +  ++   + AQ+ +LE   + F   G +L  A++ +   +  K+ +L   F + LL  T
Sbjct: 166 DQRDSLALNTAQQKLLEDTYKSFTRGGANLSDADKVKLRALNEKIGKLSLEFGDNLLAET 225

Query: 178 QAWTKHITDEAALAGLTDSAKAQMAAAAQAKDLQG-WLINLEFPSYYAVMTYAQDRALRE 236
            A+   I + A L GL        A  A+ K   G W+   + PS    +TYA +R LRE
Sbjct: 226 NAFELVIDNAADLKGLPQDVINTAAQTAEKKGHPGKWVFTTQRPSITPFLTYADNRELRE 285

Query: 237 EVYAAYCTRASDQGPNAGQNDNGPVMEEILDLRQELAKLLGFASFAELSLATKMAESSDQ 296
           ++Y  Y  R    G N   +DN  ++ ++  LR E A+L+G+ S A   L  + A++ + 
Sbjct: 286 KIYKGYVER----GNNNNAHDNKKILAQMAALRAERAQLMGYKSHAHFVLEERTAKTPEN 341

Query: 297 VLSFLRDLAKRSKPFAAQDLEQLKAYA-AEQGCPDLQSWDSGFYGEKLREQRYSVAQETL 355
           V   L  +   +   A  ++  ++    AE G   L +WD  +Y +K+R  +YS  ++  
Sbjct: 342 VYGLLDKVWPAALGQAKAEVAVMQELIDAEGGNFKLAAWDWWYYADKIRVAKYSFNEQET 401

Query: 356 RAYFPIDKVLSGLFAIVQRLYGIEIAELKGFDTWHPDVRLFEIKE-NGEHVGRFFFDLYA 414
           R YF ++  L G+F    RLYGI + E      ++ +VR +E+ + +G  +  F  D Y 
Sbjct: 402 RPYFSLENTLKGVFYTANRLYGITVKERTDLPKYNDEVRTWEVYDKDGSLMAIFLGDYYV 461

Query: 415 RANKRGGAWMDGARDRRRTAEGVLQSPVANLVCNFTPADSGKPALLTHDEVTTLFHEFGH 474
           R +KRGGAW +  R + R   GV   P+   V N+      +PALLT DE +TLFHEFGH
Sbjct: 462 RDSKRGGAWANAYRKQYRM-HGVESKPIIVNVLNYPRPVGDEPALLTFDEASTLFHEFGH 520

Query: 475 GLHHLLTRVEYSGVSGINGVAWDAVELPSQFMENWCWEPEGLALISGHYETGEPLPQDLL 534
            LH +L+ VEY   +G   V  D VE PSQ MENW  +PE LA  + HY+TGE +PQ L+
Sbjct: 521 ALHAMLSDVEYRSQAG-TSVPRDYVEFPSQVMENWMTQPEVLAQFAKHYKTGEVIPQSLV 579

Query: 535 QKMLAAKNFQSGLMMVRQLEFSLFDFELHA-THGDGRSVLQVLEGVRDEVSVMRPPAYNR 593
           +K+ AA  F  G   V  +  +  D + H  +  + +   +       ++ ++   A   
Sbjct: 580 EKIQAASKFNQGFATVEYMAATKLDLDWHTLSDFEPKDAAKFEADSLSKMGLIEEIAPRY 639

Query: 594 FPNSFAHIFAGGYAAGYYSYKWAEVLSADAFSKFEEDGVLNAATGRAFREAILARGGSQE 653
               F+HIF+GGY+AGYYSY W+++L ADAF  F+E+G+ + AT  AFR  +L++GGS++
Sbjct: 640 RSTYFSHIFSGGYSAGYYSYLWSDILGADAFEAFKENGIFDKATADAFRNNVLSQGGSED 699

Query: 654 PMVLFVDFRGRAPSIDALLRHSGL 677
           PM+L+  FRG+   I+ LLR  GL
Sbjct: 700 PMLLYKQFRGKEAGIEPLLRSRGL 723