Pairwise Alignments

Query, 552 a.a., sulfate transporter from Pseudomonas fluorescens FW300-N2E3

Subject, 588 a.a., sulfate permease family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  364 bits (934), Expect = e-105
 Identities = 220/558 (39%), Positives = 328/558 (58%), Gaps = 37/558 (6%)

Query: 20  RNIVSGVIVGVVALPLAMAFAIASGVKPEQGIYTAIVSGLLVSLFGGSRLQIAGPTGAFV 79
           +++++G+ VG++A+PLAMA AIASGV P+ G+YTAIV G ++++ GGSR  ++GPT AFV
Sbjct: 36  QDLLAGLTVGIIAIPLAMALAIASGVPPQYGLYTAIVGGFIIAMTGGSRYSVSGPTAAFV 95

Query: 80  VILSGVTAKYGVDGLQIATMMAGAILLLLGITKLGAIIKFIPDPVIVGFTAGIGVIIWVG 139
           V+L  +  ++G+ GL IAT+M+G +L+ + + +LG +I +IP+ V +GFTAGIGV+I   
Sbjct: 96  VLLYPIAQQFGLAGLLIATVMSGMMLVAMAMLRLGRLILYIPESVTLGFTAGIGVVIATL 155

Query: 140 QWKDFFGLP-KISGEHFHERLWHLVQALPSFHVPTTLLALSSLVLVITAP--KIPGIRRV 196
           Q KDFFGL  +   E +  +L  L QALPS H+P+  +A ++L  ++  P  KIP    +
Sbjct: 156 QLKDFFGLQIEHMPEQYFAKLMALGQALPSLHLPSLFIAAATLATMLLWPRLKIPVPAHL 215

Query: 197 PGPLIAMVVVTALQAFFQFAGVATIGSAF------GGIPQGLPEVGLPAITLP------- 243
           P   +  ++   L A    A + TIG+ F      GGI  G+P V LP    P       
Sbjct: 216 PAIALGSILALILNAMG--AEIETIGTRFHYQLTDGGIGSGIPAV-LPHFEWPWLQTGPN 272

Query: 244 -QVIE--------LIGPAFAIAMLGAIESLLSAVVADGMAGTKHDSNQELIGQGIANLVT 294
            Q  E        L+  AFAIAMLGAIESLL AVV DGM G +H +N EL+GQGI N++ 
Sbjct: 273 GQAFEFNLAAFQALLPAAFAIAMLGAIESLLCAVVLDGMTGKRHSANSELLGQGIGNIIA 332

Query: 295 PLFGGFAATGAIARTATNIRNGGNSPIAGFVHALTLILLILFLAPLASDIPLCALAAILF 354
           P FGG  AT AIAR+A N++ G  SPIA  +HAL +++ ++ LA + + +P+ A+AA+L 
Sbjct: 333 PFFGGIPATAAIARSAANVKAGAQSPIASMIHALVVLIGLVALAGILAYLPMSAMAALLL 392

Query: 355 VVAYNMSELKHFQRMVKRAPKADVAILLITFSLTVFSDLAIAVNIGVILAMLQFMRRMAS 414
           VVA+NMSE      ++K AP +D+ + L  FSLTV  D+ IA+++G+ILA L FM+ +A 
Sbjct: 393 VVAWNMSEAPKAVHLLKTAPTSDILVFLSCFSLTVIFDMVIAISVGIILAALLFMKEIAE 452

Query: 415 SVEVQQMVEKELEVELRINGHVRLPPGVLVYTIEGPLFFGAAETFERVLAQTHTDPGTLI 474
             ++  +   +  V+        LP    V  I GPLFF AA+     +A    D   ++
Sbjct: 453 MTKLYDISSNKRYVD------QSLPADWAVLKINGPLFFAAADRIFAEIASLTQDKQVIV 506

Query: 475 IRLKRVPFMDITGLQTLLEVIEHLRKRSIVVKLCEANEKVLGKLDKAGILQALGPEHYHA 534
           + L  V  +D  GL  L ++IE  +     + + +   + +  L KA I    G   ++ 
Sbjct: 507 LYLDGVSILDAGGLAALSKLIEKCKLNQTKLLITDLQFQPIRTLAKAKIQPVEGVLKFYP 566

Query: 535 DFSGAL---GSFEIDKTP 549
               AL    S E++ TP
Sbjct: 567 TLREALTEAPSPELEATP 584