Pairwise Alignments

Query, 307 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

Subject, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

 Score =  205 bits (522), Expect = 9e-58
 Identities = 110/295 (37%), Positives = 170/295 (57%), Gaps = 5/295 (1%)

Query: 1   MTLTELRYIVTLAQEQHFGHAAERCHVSQPTLSVGVKKLEDELGVLIFERSKSAVRLTPV 60
           M + +  Y+V LA  +HF  AAE C VSQPTLS  ++KLEDE+G  + ERS   V  T  
Sbjct: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60

Query: 61  GEGIVAQAQKVLEQAQGIRELAQAGKNQLTAPLKVGAIYTVGPYLFPHLIPQLHRVAPQM 120
           G  +V QA+K+L + +  +++A      +T PL +G I T+GPYL P +IP L    P++
Sbjct: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120

Query: 121 PLYIEENFTHVLRDKLRNGELDAIIIALPFNEADVLTLQLYDEPFYVLMPAQHPWTEKES 180
            LY+ E  T+ L  +L  G+LD +++A     A    ++LY+E   + +P  H W  ++ 
Sbjct: 121 ELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDE 180

Query: 181 IDASLLNDKSLLLLGEGHCFRDQVLEACPTLAKGNDGAKHTTVESSSLETIRHMVASGLG 240
           +D   L  K++L LG+GHC RDQ L  C      +D       +++SLET+R+MVA+G G
Sbjct: 181 VDMLELKGKTVLALGDGHCLRDQALGFCFAAGAKDD----ERFKATSLETLRNMVAAGAG 236

Query: 241 ISILPLSAVDSHHYSPGVLEVRPLSPPVPFRTVAIAWRASFPRPKAIEILADSIR 295
           I++LP  A+       GV  +R ++ P+P R + +A+R   P  +  E LA+ I+
Sbjct: 237 ITLLPELALPEDKTKDGVCYLRAVN-PIPSRRLVLAYRPGSPLRQRFEQLAEVIK 290