Pairwise Alignments

Query, 210 a.a., threonine transporter RhtB from Pseudomonas fluorescens FW300-N2E3

Subject, 207 a.a., transporter, LysE family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  120 bits (300), Expect = 2e-32
 Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 1/205 (0%)

Query: 1   MVLETWLAFFAACWVISLSPGAGAIASMSCGLQYGFWRGYWNALGLQLGLAMQIAIVAAG 60
           M  ETWL +F A  +I +SPG  A+ SMS G+ +G  R     LG      + +A  AAG
Sbjct: 1   MQTETWLLYFFAIVLIGISPGPIAMLSMSHGIHFGKKRSIATGLGSVSAALILMAASAAG 60

Query: 61  VGAILAASATAFYAIKWFGVAYLVYLAVKQWRALPSNMSDDAAIRQIGKPLALLFR-GFL 119
           +GAI++AS   F  +KW G AYLV+L +K         + +    +    L  LF+  FL
Sbjct: 61  LGAIISASEYGFTILKWCGAAYLVFLGIKLLLTKQQGQTLEVVKTEGKGTLKQLFKQAFL 120

Query: 120 VNVSNPKALVFMLAVLPQFIDPHAPLVAQYLILGITMICVDLIVMAGYTGLASKVLRLLR 179
           V +SNPK L+F  A+ PQFID  AP + Q  IL +T   VD   +  Y  +A+ +   L+
Sbjct: 121 VGISNPKDLLFFAALFPQFIDLTAPQLPQLTILALTWALVDFSFVMIYASMANVLAPSLK 180

Query: 180 TPKQQRRMNRTFAGLFIGAAGLLAT 204
              +    +RT  G+F+  A +L +
Sbjct: 181 ASNKLHWFDRTSGGVFLTLAAILVS 205