Pairwise Alignments

Query, 380 a.a., transporter from Pseudomonas fluorescens FW300-N2E3

Subject, 388 a.a., Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  419 bits (1077), Expect = e-122
 Identities = 212/360 (58%), Positives = 271/360 (75%), Gaps = 2/360 (0%)

Query: 22  LVKIDRVTKKFDETIAVDDVSLEIRKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFL 81
           +++I+ V KKF +  AV  VSL++ +GE   LLGGSG GK+TLLRM+AGFE+PT GRI +
Sbjct: 30  IIEIETVVKKFGDFTAVAGVSLDVFEGEFLCLLGGSGCGKTTLLRMMAGFEQPTSGRILI 89

Query: 82  DGVDITEMPPYERPINMMFQSYALFPHMTVAQNIAFGLKQDKIPSAEVDARVTEMLKLVQ 141
           DG D+T +PPY+RP+NMMFQSYALFPHM+V QNIAFGLKQD +P AE +ARV EML LVQ
Sbjct: 90  DGRDMTGVPPYDRPVNMMFQSYALFPHMSVEQNIAFGLKQDGMPKAEREARVAEMLSLVQ 149

Query: 142 MSQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIER 201
           + ++AKRKPHQLSGGQRQRVALARSLAK P++LLLDEP+ ALDKKLR + QL+LV I E+
Sbjct: 150 LERFAKRKPHQLSGGQRQRVALARSLAKHPRVLLLDEPLSALDKKLRERTQLDLVNIQEK 209

Query: 202 VGVTCVMVTHDQEEAMTMAERIAIMHLGWIAQIGSPIDIYETPTSRLVCEFIGNVNIFEG 261
            G+T V+VTHDQEEAMTMA+R+AIM  GWI QI +P  +YE P +R V EF G+VN+FEG
Sbjct: 210 TGITFVVVTHDQEEAMTMADRVAIMDEGWIVQIDAPQSMYEYPNTRFVAEFFGSVNMFEG 269

Query: 262 EVVDDAEGHALITCKDLDRNIYVGHGISTSVQDKSVTYAIRPEKLLVTAEMPTCEHNWSS 321
            +V+D   H +I   +L+  IYVGHG+S   +  +V  A+RPEK+ +  E P   +NW++
Sbjct: 270 VLVEDEPDHVMIEAPELENPIYVGHGVS-GHEGATVWAALRPEKVTLVTEKPDRPYNWAA 328

Query: 322 GKVHDIAYLGGHSVFYVELPSGKIVQSFVANAERRGQ-RPTWGDQVYVWWEDDSGVVLRS 380
           G+V DI YLG  S + V L +GK ++  VAN ER  +   TWGD+VYV W   S VV+ S
Sbjct: 329 GEVKDIVYLGSTSTYIVGLDTGKRMRVTVANHERDVEWEITWGDRVYVSWAATSAVVVSS 388