Pairwise Alignments

Query, 239 a.a., 16S rRNA methyltransferase from Pseudomonas fluorescens FW300-N2E3

Subject, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Klebsiella michiganensis M5al

 Score =  196 bits (498), Expect = 3e-55
 Identities = 107/241 (44%), Positives = 146/241 (60%), Gaps = 3/241 (1%)

Query: 1   MRLSRFFIDAPLSLGEH-ELPEAQAHYISRVLRMAEGDALQVFDGSGQEFRGTLAEVGKK 59
           MR+ R      ++ G    L +  A+++ RVLRM +G A+++FDGS Q F   + E GKK
Sbjct: 1   MRIPRIHHPERITTGSQIALSDDAANHVGRVLRMGKGQAIELFDGSNQIFEAVIVEAGKK 60

Query: 60  RVRVALTESFAGQIESPLQIHLGQGLSRGERMDWAIQKATELGVTEITPIFSDRCEVRLK 119
            V V +  S     ESPL IHLGQ +SRGE+M++ IQK+ ELGV+ ITP+FS+RC V+L 
Sbjct: 61  NVLVEVQSSKVDNRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLD 120

Query: 120 DERADKRLQHWRQVAISACEQCGRSRVPVIHPPLLLADWLKQSEAELKLVLHPVAEPLVS 179
            ER  K++Q W+++AI+ACEQ GR+ VP I P + L  W  + +  LKL LHP A   ++
Sbjct: 121 AERLQKKIQQWQKIAIAACEQSGRNVVPEIRPAMQLEAWCAEQDEGLKLNLHPRASASIN 180

Query: 180 --HAKPSTLAFLIGPEGGLSDVEVDQAQSAGFHSARLGPRVLRTETAPVVALAVAQQLWG 237
                   +  LIGPEGGLS  E+       F    LGPRVLRTET  + A+   Q  +G
Sbjct: 181 TLPLPVERIRLLIGPEGGLSAEEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFG 240

Query: 238 D 238
           D
Sbjct: 241 D 241