Pairwise Alignments

Query, 239 a.a., 16S rRNA methyltransferase from Pseudomonas fluorescens FW300-N2E3

Subject, 243 a.a., 16S ribosomal RNA methyltransferase RsmE (RefSeq) from Shewanella sp. ANA-3

 Score =  202 bits (515), Expect = 4e-57
 Identities = 105/241 (43%), Positives = 151/241 (62%), Gaps = 3/241 (1%)

Query: 1   MRLSRFFIDAPLSLGEH-ELPEAQAHYISRVLRMAEGDALQVFDGSGQEFRGTLAEVGKK 59
           MR+ R +   PL++ +   L E  A +I +VLRM  G+ + +F+G G ++   + + GKK
Sbjct: 1   MRVPRIYQPQPLAVNQQLNLDEDGAAHIGKVLRMGSGEHISLFNGDGNDYLAEIVDAGKK 60

Query: 60  RVRVALTESFAGQIESPLQIHLGQGLSRGERMDWAIQKATELGVTEITPIFSDRCEVRLK 119
            V V +    A   ESPL +HLGQ +SRG+RM++ IQK+ ELGV  ITP+FSDRC V+L 
Sbjct: 61  SVTVKVLSCEANPSESPLNLHLGQVISRGDRMEFTIQKSVELGVNTITPLFSDRCGVKLT 120

Query: 120 DERADKRLQHWRQVAISACEQCGRSRVPVIHPPLLLADWLKQSEAELKLVLHPVAEPLVS 179
            ER +K++Q W+++ ISACEQ GRS+VP++ P + L  W  +  + LKL LHP A   ++
Sbjct: 121 GERLEKKIQQWQKIVISACEQSGRSQVPIVRPAMELQQWCSEPTSALKLNLHPRAAHGIN 180

Query: 180 --HAKPSTLAFLIGPEGGLSDVEVDQAQSAGFHSARLGPRVLRTETAPVVALAVAQQLWG 237
                 + +  LIGPEGGLS  E+   ++  F    LGPRVLRTETA + A+   Q  +G
Sbjct: 181 GLDLSHTRVRLLIGPEGGLSAEEIAMTETYQFTDVLLGPRVLRTETASLTAITALQLRFG 240

Query: 238 D 238
           D
Sbjct: 241 D 241