Pairwise Alignments

Query, 423 a.a., yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) from Pseudomonas fluorescens FW300-N2E3

Subject, 422 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  509 bits (1310), Expect = e-149
 Identities = 253/423 (59%), Positives = 319/423 (75%), Gaps = 2/423 (0%)

Query: 1   MSYVIDRRLNGKNKSTVNRQRFLRRYRDHIKKAVEEAVSRRSITDMEHGEQISIPGRDID 60
           M+  IDRRLN K KSTVNRQRF+ RY+  IKKAV +AV+RRS+TD++ GE+ISIP RDI 
Sbjct: 1   MANFIDRRLNTKGKSTVNRQRFINRYKQQIKKAVSDAVTRRSVTDIDKGEKISIPTRDIS 60

Query: 61  EPVLHHGRGGKQTIVHPGNKEFTSGEHIARP-PGGGGGRGPGKAGNSGEGMDEFVFQITQ 119
           EP  H G+GG +  VHPGN +F+ G+ + RP  GGG G G G A NSGEG D+FVFQI++
Sbjct: 61  EPTFHQGQGGMRERVHPGNDQFSRGDKVERPHQGGGQGSGQGDASNSGEGQDDFVFQISK 120

Query: 120 EEFLEFMFEDLELPNLVKRNLSGTDTFKTVRAGISNEGNPSRINIIRTLRSAHARRIALS 179
           +E+LE +FEDLELPNL +  L+    ++T RAG +N+G P+ INIIR+LRS+ ARRIA+S
Sbjct: 121 DEYLELLFEDLELPNLQRNRLNKLVEYQTYRAGFTNDGVPANINIIRSLRSSLARRIAMS 180

Query: 180 GSSREKLRVAKEELARLKQEEPDNFGDIQEIEAEIERLSARINRVPFLDTFDLKYNLLIK 239
            S +  L+  K EL  L+Q        I  ++ +I  L A+I +VPF+DTFDL+YN   K
Sbjct: 181 SSKKALLKELKAELEALEQTPGSEAEKIIALKEQIAELEAKIAKVPFIDTFDLRYNNFAK 240

Query: 240 QPNPSSKAVMFCLMDVSGSMTQATKDIAKRFFILLYLFLKRNYEKIDVVFIRHHTSAREV 299
           +  PSS+AVMFCLMDVSGSM QATKD+AKRF+ILLYLFL R Y+ ++VV+IRHHT A+EV
Sbjct: 241 REVPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLTRTYKNLEVVYIRHHTQAKEV 300

Query: 300 DEEEFFYSRETGGTIVSSALKLMQEIMAERYPSNDWNIYAAQASDGDNWNDDSPICRDIL 359
           DE EFFYS+ETGGTIVSSALKLM EI  ERYP ++WNIYAAQASDGDNW DDSP CR IL
Sbjct: 301 DEHEFFYSQETGGTIVSSALKLMHEIQRERYPESEWNIYAAQASDGDNWADDSPTCRQIL 360

Query: 360 INQIMPFVQYYTYVEITPREHQALWYEYERISEAFSDTFAQQQLVSAGDIYPVFRELFQR 419
             +++P V+Y++Y+EIT R HQ LW EYE + +   D  A Q +  A DIYPVFRELF++
Sbjct: 361 ERKLLPVVRYFSYIEITNRAHQTLWREYEGLQKT-HDNIAVQHIKQAEDIYPVFRELFKK 419

Query: 420 RLV 422
           + V
Sbjct: 420 QAV 422