Pairwise Alignments

Query, 272 a.a., rRNA methyltransferase from Pseudomonas fluorescens FW300-N2E3

Subject, 317 a.a., Probable dimethyladenosine transferase KsgA (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (high level kasugamycin resistance protein KsgA) (kasugamycin dimethyltransferase) from Mycobacterium tuberculosis H37Rv

 Score =  150 bits (378), Expect = 4e-41
 Identities = 101/269 (37%), Positives = 140/269 (52%), Gaps = 14/269 (5%)

Query: 1   MTEHYQHRARKRFGQNFLHDAGVIDRILRSIHAKPDDRLLEIGPGQGALTEGLLNSGAQL 60
           + +    R RK  GQNF+HDA  + R++ +      D +LE+GPG G+LT  LL+ GA +
Sbjct: 22  LAKELDFRPRKSLGQNFVHDANTVRRVVAASGVSRSDLVLEVGPGLGSLTLALLDRGATV 81

Query: 61  DVVELDKDLIPILNQQFAGKSNFNLHQ-----GDALKFDFNSLNAAPNSLRVVGNLPYNI 115
             VE+D  L   L Q  A  S+  +H+      D L      L AAP +  VV NLPYN+
Sbjct: 82  TAVEIDPLLASRLQQTVAEHSHSEVHRLTVVNRDVLALRREDLAAAPTA--VVANLPYNV 139

Query: 116 STPLIFHLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGP 175
           + P + HLL     IR +  M+Q EV ERLAA PG  ++G  S+ +++  RV     V P
Sbjct: 140 AVPALLHLLVEFPSIRVVTVMVQAEVAERLAAEPGSKEYGVPSVKLRFFGRVRRCGMVSP 199

Query: 176 SAFNPPPKVDSAIVRLVPHAVLPHPAKD--HRLLERVVREAFNQRRKTLRNTL-----KA 228
           + F P P+V S +VR+  +   P P  D   R +  +V  AF QRRKT RN         
Sbjct: 200 TVFWPIPRVYSGLVRIDRYETSPWPTDDAFRRRVFELVDIAFAQRRKTSRNAFVQWAGSG 259

Query: 229 LLSNAEIEAAGVDGSLRPEQLDLAAFVRL 257
             S   + AA +D + R E L +  FVRL
Sbjct: 260 SESANRLLAASIDPARRGETLSIDDFVRL 288