Pairwise Alignments

Query, 319 a.a., biotin--protein ligase from Pseudomonas fluorescens FW300-N2E3

Subject, 319 a.a., birA bifunctional protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  197 bits (501), Expect = 3e-55
 Identities = 116/314 (36%), Positives = 184/314 (58%), Gaps = 10/314 (3%)

Query: 4   LLKLLKDGRFHSGQALGAALGISRSAVWKQLQHLEAELGLSIHKVRGRGYQLSAPLTLLS 63
           +L LL +  F SG+ L   LGISR+AV K +  LE + G++I  V+GRGY+L+ P++L+ 
Sbjct: 11  ILGLLSNEHFVSGEELATQLGISRAAVSKHVDTLE-DYGVAIFSVKGRGYKLANPISLID 69

Query: 64  SAKIAEHSPACDWPVLVFDSIDSTNAEALRSIERGMAAPFLVLAERQTAGRGRRGRKWVS 123
           S+++ +   A D     FD I STN   L      + +  L +AE Q+AGRGRRGR WVS
Sbjct: 70  SSRLIQ---AIDNRCFYFDEIPSTNGFMLGHTSE-LKSGDLCVAEYQSAGRGRRGRTWVS 125

Query: 124 PFAENIYYSLVLRIDGGMRQLEGLSLVVGLAVMQTLRDLGIAGAGLKWPNDVLVGEKKIA 183
           P+  ++Y+S       GM Q  GLSLVV  ++++ L+  G+   G+KWPND+ +  KK+A
Sbjct: 126 PYGHHLYFSQFWSFPQGMAQAMGLSLVVACSLVEVLKSFGVENVGVKWPNDIYLNFKKLA 185

Query: 184 GILLELVGDPADVCHVVLGVGINVNMQIAD--EVDQQWTSMRLEAGRAFDRNLLVAHLGI 241
           GIL+E+ G     C +++G+G+N+ M       +DQ W+ +          +L++A L  
Sbjct: 186 GILIEMSGQADSECQLIIGIGVNMAMSEGQGKGIDQPWSDLSGLTCIPNKTDLVIA-LHK 244

Query: 242 VLQGYLSRHQSAGFSALRAEWEQSHLWQGRAVSLIAGVSRIDGEVIGIDGQGALRL-NVG 300
            L+  +   +  G  A +  W+++ L+ G+ + L+ G + +DG   GID QGA+ L N  
Sbjct: 245 QLKRDIQLFEREGLVAFKTRWQEADLFHGKEIRLLMGENHLDGICRGIDEQGAVLLENAD 304

Query: 301 GVEKVFSGGELSLR 314
           G++  + GGE+SLR
Sbjct: 305 GIQ-AYIGGEISLR 317