Pairwise Alignments

Query, 944 a.a., ABC-ATPase UvrA from Pseudomonas fluorescens FW300-N2E3

Subject, 941 a.a., excinuclease ABC, A subunit (RefSeq) from Shewanella loihica PV-4

 Score = 1409 bits (3647), Expect = 0.0
 Identities = 693/941 (73%), Positives = 812/941 (86%), Gaps = 2/941 (0%)

Query: 1   LDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           +DKI +RGARTHNLKNI+LT+PRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGIPRC 120
           ARQFLS+MEKPDVD IEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLL+ARVG PRC
Sbjct: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC 120

Query: 121 PDHDIPLEAQTVSQMVDLVLAEPEGSKLMLLAPVIRERKGEHLSVFEELRAQGFVRARVN 180
           P H+ PL AQTVSQMVD VL  PEGS+ MLLAPVI +RKGEH+ + + L AQGF+RAR++
Sbjct: 121 PTHNQPLAAQTVSQMVDKVLTLPEGSRQMLLAPVINDRKGEHVKLLDSLAAQGFIRARID 180

Query: 181 GKLFELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE 240
           G++ +L + P L+   KH+I+VVVDRFKVR DLQQRLAESFETAL+L+ GIA VA MD +
Sbjct: 181 GEVCDLSDPPALELHVKHTIEVVVDRFKVRDDLQQRLAESFETALELSGGIATVASMDGD 240

Query: 241 PGEEMIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLV-NGEL 299
             EE++FSA FAC  CG++++ELEP++FSFNNPAGACPTCDGLGV+QFFD  R++ N EL
Sbjct: 241 -SEELLFSANFACTHCGYSMAELEPRIFSFNNPAGACPTCDGLGVQQFFDADRVITNTEL 299

Query: 300 TLAEGAIRGWDRRNVYYFQMLGSLASHYGFSLEVPFNQLPADQQKVILHGSGTQNVDFKY 359
           +LA GAIRGWDRRN YYFQML SLA HY F +E PF +L A  + ++LHGSG +++ FKY
Sbjct: 300 SLAGGAIRGWDRRNFYYFQMLTSLAEHYKFDVEAPFEKLSAKIRNIVLHGSGKESIAFKY 359

Query: 360 LNDRGDIVKRSHPFEGIVPNLDRRYRETESASVREELAKFLSTQPCPDCRGTRLRREARH 419
           +NDRGD+V R+HPFEGI+ N+DRRYRETES +VREELAK+++TQ C  C G+RLR EARH
Sbjct: 360 INDRGDVVVRNHPFEGILNNMDRRYRETESNAVREELAKYINTQACSSCGGSRLREEARH 419

Query: 420 VWVGEKTLPAVTNLPIGDASDYFGTLKLTGRRGEIADKILKEIRERLQFLVNVGLDYLSL 479
           V++ +  LP +T+  IG+A +YF  L LTG+R +IA+KILKE+R+RL FLVNVGL+YLSL
Sbjct: 420 VFIEDLNLPRLTDWSIGEAMEYFEQLSLTGQRAQIAEKILKEVRDRLGFLVNVGLNYLSL 479

Query: 480 DRSADTLSGGEAQRIRLASQIGAGLVGVLYILDEPSIGLHQRDNDRLLGTLKHLRDIGNT 539
            RSADTLSGGEAQRIRLASQIGAGLVGV+Y+LDEPSIGLHQRDN+RLL TL HLRD+GNT
Sbjct: 480 SRSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRDLGNT 539

Query: 540 VIVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAEGTPAEVMAHPDSLTGKYLSGRVKIEV 599
           VIVVEHDEDAIR+AD+++DIGPGAGVHGG ++ +G   E++A  +S+TG+Y+SG+ +I +
Sbjct: 540 VIVVEHDEDAIRMADHIIDIGPGAGVHGGQVICDGPLKEIVACDESVTGQYISGKKQIHI 599

Query: 600 PAKRTARNKKLSLSLKGARGNNLRDVDLEIPIGLLTCVTGVSGSGKSTLINNTLFPLSAT 659
             KR   +    + L GA GNNL+ VDL IP+GL TCVTGVSGSGKSTLIN+T + ++  
Sbjct: 600 SEKRAQYDASKVIELFGASGNNLKQVDLTIPVGLFTCVTGVSGSGKSTLINDTFYKIAHR 659

Query: 660 ALNGATTLEAAAHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPE 719
            LNGAT  E A +  + G++H DKVVDIDQSPIGRTPRSNPATYTG+FTPIRELFA   E
Sbjct: 660 QLNGATVDEPAPYKKVAGMDHCDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFAATQE 719

Query: 720 SRSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKY 779
           +R+RGY PGRFSFNVKGGRCEACQGDGLIKVEMHFLPD+YVPCD CKSKRYNRETLE++Y
Sbjct: 720 ARTRGYKPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDSCKSKRYNRETLEVRY 779

Query: 780 KGKSIHETLEMTIEEARVFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKL 839
           KGK+IHE LEMT+EEAR FFDAVPA+ARKLQTLM+VGLSYI LGQSATTLSGGEAQRVKL
Sbjct: 780 KGKNIHEVLEMTVEEAREFFDAVPAIARKLQTLMEVGLSYIGLGQSATTLSGGEAQRVKL 839

Query: 840 SRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADW 899
           ++ELSKRDTGKTLYILDEPTTGLHFADIQ LLDVLHRL+ HGNT+VVIEHNLDVIKTADW
Sbjct: 840 AKELSKRDTGKTLYILDEPTTGLHFADIQLLLDVLHRLKAHGNTIVVIEHNLDVIKTADW 899

Query: 900 LVDLGPEGGSKGGQIIAVGTPEEVAEMKQSHTGFYLKPLLE 940
           +VDLGPEGGS GG I+  GTPE+VAE   SHT  +LKPLL+
Sbjct: 900 IVDLGPEGGSGGGTILVSGTPEQVAEHPSSHTARFLKPLLK 940