Pairwise Alignments

Query, 385 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas fluorescens FW300-N2E3

Subject, 390 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) from Shewanella loihica PV-4

 Score =  351 bits (900), Expect = e-101
 Identities = 182/382 (47%), Positives = 250/382 (65%), Gaps = 4/382 (1%)

Query: 8   KRLCLLVPLLLSPAAFAVEMMPSPPQLAAKSYVLMDASSGNVLVENNGDQRLPPASLTKL 67
           K L L+  L ++ A  A  + P  P++AAK+++LMD +SG ++ E N  + L PASLTK+
Sbjct: 9   KTLLLVSSLSITAANAAPVVTPDAPKVAAKAFILMDYNSGQIIAEENAYESLNPASLTKM 68

Query: 68  MTAYIATLEIRRGQIGENDPVTVSENAWRTG---GSRMFIKVGSQVTVSDLLHGIIIQSG 124
           MT+Y+   EI+ G I   D VT+S+NAW       S+MFI+VG QV+V +L  GIIIQSG
Sbjct: 69  MTSYVIGHEIKVGNISPQDKVTISKNAWSKNFPDSSKMFIEVGKQVSVEELNRGIIIQSG 128

Query: 125 NDASVALSEHIAGSEDAFADLMNKTVADLGMNNSHFMNPTGLPNPEHYSTAHDMAILARA 184
           NDA VA++EHIAG+ED F DLMN     LGM +S+F N  GL +  H +TA+DMA+L  A
Sbjct: 129 NDACVAMAEHIAGTEDGFVDLMNSWAKQLGMRDSYFENSHGLDSENHKTTAYDMALLGAA 188

Query: 185 IIHEDPAHYAIYSQKEFFWNGIKQPNRNLLLW-RDKTVDGLKTGHTEEAGYCMVSSAVRD 243
           +I + P  Y +YS+K F +NGIKQ NRN LLW +   VDG+KTGHT  AGY +V+SA +D
Sbjct: 189 LIRDVPEEYRVYSEKSFTYNGIKQYNRNGLLWDKSLNVDGIKTGHTSGAGYNLVTSATKD 248

Query: 244 GMRLIAVVFGTNSESARAAETQKLLTYGFRFFETQTFYQKGAELAQAPVWKGTTNQVKAG 303
           GMRL++VV GT SESAR AE++KLL YGFRFFET T Y+ G       +W G    V  G
Sbjct: 249 GMRLVSVVLGTASESARKAESKKLLNYGFRFFETITPYKAGDSFVTQKIWYGDRESVDLG 308

Query: 304 LAEDLTMTLPKGQLKKLAASMTMNPQLVAPIAKGDVIGKVEVKLDDKVVHSADLIALDAV 363
           +  D  +T+ +GQ K L A+  +N +L APIAKG+ +G++  +L+ K +    L+ L  V
Sbjct: 309 VLTDTPITISRGQAKNLEANYELNKELTAPIAKGETVGRIYFQLNGKDIAQFPLVTLQEV 368

Query: 364 DQGGIFRRMWDSIRLFFYGLFN 385
           ++G  F ++ D  +  F   FN
Sbjct: 369 NEGSWFSKLMDYFKQMFASWFN 390