Pairwise Alignments

Query, 385 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas fluorescens FW300-N2E3

Subject, 390 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  340 bits (871), Expect = 5e-98
 Identities = 181/382 (47%), Positives = 248/382 (64%), Gaps = 4/382 (1%)

Query: 8   KRLCLLVPLLLSPAAFAVEMMPSPPQLAAKSYVLMDASSGNVLVENNGDQRLPPASLTKL 67
           K L L+  + L   A    + P  P +AAK+YVLMD  SG ++ E N  + L PASLTK+
Sbjct: 9   KTLLLISSVSLPVYAAQPIVTPDAPTVAAKAYVLMDYYSGQIIAEENAYESLNPASLTKM 68

Query: 68  MTAYIATLEIRRGQIGENDPVTVSENAWR---TGGSRMFIKVGSQVTVSDLLHGIIIQSG 124
           MT+Y+   EI+ G +  +D VT+S+NAW    +  S+MFI+VG  V VSDL  GIIIQSG
Sbjct: 69  MTSYVIGQEIKAGNVSPDDDVTISKNAWSKNFSDSSKMFIEVGKTVKVSDLNRGIIIQSG 128

Query: 125 NDASVALSEHIAGSEDAFADLMNKTVADLGMNNSHFMNPTGLPNPEHYSTAHDMAILARA 184
           NDA VA++EHIAG+E AF D+MN     LGM +S+F N  GL +  H +TA+DMA+L  A
Sbjct: 129 NDACVAMAEHIAGTEGAFVDMMNSWSKQLGMRDSYFENSHGLDSENHKTTAYDMALLGAA 188

Query: 185 IIHEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDK-TVDGLKTGHTEEAGYCMVSSAVRD 243
           +I + P  Y IYS+K + +NGIKQ NRN LLW +   VDG+KTGHT  AGY +V+SA +D
Sbjct: 189 LIRDVPEEYRIYSEKYYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATKD 248

Query: 244 GMRLIAVVFGTNSESARAAETQKLLTYGFRFFETQTFYQKGAELAQAPVWKGTTNQVKAG 303
           GMRLI+VV GT SE+AR AE++KLLTYGFRFFET T Y+ G       +W G  + V  G
Sbjct: 249 GMRLISVVMGTQSEAARKAESKKLLTYGFRFFETVTPYKAGDSFVTQQIWYGDKSTVDLG 308

Query: 304 LAEDLTMTLPKGQLKKLAASMTMNPQLVAPIAKGDVIGKVEVKLDDKVVHSADLIALDAV 363
           +A D  +T+ +G+ K L A+  +   L AP+ KG+ +G++  +LD K +    L+ L  V
Sbjct: 309 VATDTPITVSRGRAKDLKANFELTKPLDAPLKKGETVGRLYFQLDGKDIAQFPLVTLQEV 368

Query: 364 DQGGIFRRMWDSIRLFFYGLFN 385
           ++G  F ++ D  +  F G F+
Sbjct: 369 NEGSWFSKLVDYFKQLFSGWFS 390