Pairwise Alignments

Query, 1229 a.a., exodeoxyribonuclease V subunit beta from Pseudomonas fluorescens FW300-N2E3

Subject, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

 Score =  717 bits (1852), Expect = 0.0
 Identities = 479/1243 (38%), Positives = 676/1243 (54%), Gaps = 102/1243 (8%)

Query: 9    LAFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGDESAGFGRELLPPQILVVTFTDAAT 68
            L FPL G++LIEASAGTGKT+TI+ LYLRLVLGHG         L   QILVVTFT+AAT
Sbjct: 15   LRFPLHGARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAAT 74

Query: 69   KELRERIRTRLAEAARFFRDETPAPDSLIAELRGQFSPEQWSGCANRLDIAAQWMDEAAV 128
             ELR+RIR RL +A   F     + D L+  L  +F+    +   + L  A + MDEAA+
Sbjct: 75   AELRDRIRRRLHDARLAFA-RGASDDPLLRSLLAEFTDHNLA--VSLLLSAERQMDEAAI 131

Query: 129  STIHSWCQRMLREHAFDSGSLFTQTLEVDHSNLLGEVLRDYWRLFCYPMQGDALNWVRSH 188
             TIH +CQRML ++AF+SGS F      D S L  +V+ DYWR   YP+     + VR  
Sbjct: 132  FTIHGFCQRMLTQNAFESGSRFENEFVTDESRLKAQVVADYWRRQFYPLPISLASEVRRL 191

Query: 189  WGGPAALLSRVRGLFASERDSAEGKEPAELITECL--------QARRDALLELKAPWRQW 240
            W  P+ALL+ + G  +          P +L T  +        QA+   + E+K  W   
Sbjct: 192  WPAPSALLAEIAGYLSGP--------PVKLTTPLMEGDLAALQQAQIARICEIKQHWLVE 243

Query: 241  AQELREICLQGVASKSVDGRKMQARYFEPWFEKICTWAEDDGLEQLDIGTGFNRLTPDGM 300
             +E+          K+     ++          +  WA+ +    L + +     T  G+
Sbjct: 244  REEIEPAVTGSDLHKNSQNALLRR------LPILDAWAQSE-THDLHVPSELEEFTQSGL 296

Query: 301  -AEAWKGQAPSHPGLDAMSGLKASLDALPTPDAAVLKHAAQWVGARFEEEKRRRAEMGFD 359
             A++ KG  P     + +    A   +L TP   +L HA         + K     + FD
Sbjct: 297  LAKSKKGNPPQLALFERIEAFLAEPVSLKTP---LLVHAIHHCRHWLAKAKSTHHWLSFD 353

Query: 360  DMLLRLDAALRAEGGERLATLIREQFPVALIDEFQDTDPVQYWIFESIYRIEDNNPECGL 419
            D+L +L AAL  +    L   IR  +PVA+IDEFQDTDP+QY IF  +Y    + P+CGL
Sbjct: 354  DLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYL---DYPQCGL 410

Query: 420  FLIGDPKQAIYAFRGADIYTYLRARQATSGRLHTLGTNFRSSHGMVDAVNHVFQRAEARE 479
             +IGDPKQAIYAFRGADI+TY++AR   +   +TLGTN+RSS  MV AVN VF  A    
Sbjct: 411  LMIGDPKQAIYAFRGADIFTYIKARNQVNAH-YTLGTNWRSSAAMVAAVNQVFSSATH-- 467

Query: 480  QGRGAFLFREKNGENPVPFLPVESQ--GRKESLQINGQAVPALNIWQLSS-EQPLSGVVY 536
                 F++ +      +PF PV +     K    + GQ  PAL  W     ++P S   Y
Sbjct: 468  ----PFIYSDD-----IPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKPQSKTDY 518

Query: 537  RQQLAAACASEITALLNGGQQGRAGFVRGAEDLQGLLPADIAILVRDGKEAQAVRNELSV 596
              Q+A ACA++I  +L     G A F RG    + +   D+A+LVR G EA+ VR+ LS 
Sbjct: 519  YAQMAEACAAQIQHILTASASGAATFHRG----EAIEAGDLAVLVRTGNEARMVRDALSQ 574

Query: 597  RGVRSVYLSDKDSVFAAQEAHDLLSWLKACAEPDVERPLRAALASITLNLSLTELERLNQ 656
            +G+ SVYLS++DSVFA+  A D+   L A  +P+ ER LRAA+AS    L+ +EL+ LN 
Sbjct: 575  QGIASVYLSNRDSVFASDVAQDIERLLLAVWQPEDERLLRAAVASNLFALTASELDALNN 634

Query: 657  DELAWEKRVMQFREYRVIWRSQGILPMLRRLLHDFELPQALIARSDGERILTNLLHLSEL 716
            DE  WE+ + +FR+YR +W  +G+LPMLR +L    + +  +A S+GER LT+ LH+SEL
Sbjct: 635  DENEWEQLIAEFRQYRRLWSERGVLPMLRAVLTQRHIAERWLAESEGERWLTDYLHISEL 694

Query: 717  LQQAAAELDGEQALIRHLSEHLALSGQ---AGEEQILRLESDEQLVKVVTIHKSKGLEYP 773
            LQQA  E+D +Q L+R L++ +A + Q     +EQI RLES+ +LV++VTIHKSKGLEYP
Sbjct: 695  LQQATREIDSDQGLLRFLTQAMADAAQGLGGSDEQIQRLESERRLVQIVTIHKSKGLEYP 754

Query: 774  LVFLPFICSAKPVDGSRLPMHYHDA-NGQAQITLSPTPELIALADDERLAEDLRLLYVAL 832
            LVFLPF+ S +     +    Y+DA +    + L+   E +A AD ERLAEDLRLLYVAL
Sbjct: 755  LVFLPFVMSYRESSEGK----YYDAESATTWVDLTGNEEALAKADQERLAEDLRLLYVAL 810

Query: 833  TRAQHACWLGVTDLKRGNNNS--SVLHLSALGYLLGGGEKLVESTALKRWLEDLQQ---- 886
            TRA + C++G+  L+ GN++   +  H SA+G+LL  G+        +  + DLQQ    
Sbjct: 811  TRAVYGCFIGIAPLRNGNSSQEPTSAHRSAMGFLLQDGQ--------EGGIADLQQALLK 862

Query: 887  ---NCSALSYGEMPEATTERFLPPRNEATLLAPLIPKRKAAENWWIASYSALRIGDSLSA 943
               N   +     P+   + + PP+ +   L      +     W + SYS L +  S  A
Sbjct: 863  QCENLPDVVQCPPPKRFEQAYQPPQLDERELTARELSQAIDRRWRVTSYSGL-VMQSSHA 921

Query: 944  GSDEAPESPQAQKLFDDERLDPDAPRE-----VLASGGDIHRFPRGPNPGTFLHGLLEWA 998
              D   E P    L +    D D+ +E     + +    I  FPRG  PGTFLH L E  
Sbjct: 922  RHDPLQELP----LLEVGGFDLDSAQERDGAALESVERSIFNFPRGARPGTFLHSLFEEV 977

Query: 999  GDEGFAADPKSIENAIARRCNRRGWEGWINTLSDWLQHLLQAPL--RIGTEQPPVVFEQL 1056
              +  A    + +  +    + +    W+  L   +  +L  PL  +    Q  +  ++L
Sbjct: 978  DFQQSAHSEPNTKIILELMESEQIESEWLPVLQQLVDTVLSTPLDGKALRLQQIMAAQRL 1037

Query: 1057 TEYRVEMEFWFASHKVDVLKLDELVRQY----THAGASRVVAEPVLLNGMFKGFIDLTFE 1112
            T    E+EF      +D   L+ + +++     HAG     A    + GM KGFIDL F+
Sbjct: 1038 T----ELEFLLPIEVLDAPTLNRITQRHDPLSAHAGDLGFHA----VQGMLKGFIDLVFQ 1089

Query: 1113 HAGRYYVADYKSNWLGADDSAYTEQAMEQSMLDHRYDLQYVLYLLALHRQLKARLADYDY 1172
            + GRYYV D+KSN LG D +AY  Q +  +M +HRYDLQY +Y LALHR L++RLA Y+Y
Sbjct: 1090 YQGRYYVLDWKSNHLGDDPAAYHPQRLGSAMAEHRYDLQYQIYALALHRFLRSRLAHYNY 1149

Query: 1173 DRHMGGALYLFLRGTRAPG-QGVYFTRPPRELIERLDRLFQGK 1214
            ++H GG  YLFLRG    G QGV+ T+P   L++ LD L  G+
Sbjct: 1150 EQHFGGVFYLFLRGMDGRGDQGVFHTKPSLALLDELDGLIAGR 1192