Pairwise Alignments

Query, 1229 a.a., exodeoxyribonuclease V subunit beta from Pseudomonas fluorescens FW300-N2E3

Subject, 1234 a.a., exodeoxyribonuclease V, beta subunit from Marinobacter adhaerens HP15

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 580/1231 (47%), Positives = 742/1231 (60%), Gaps = 43/1231 (3%)

Query: 9    LAFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGDESAGFGRELLPPQILVVTFTDAAT 68
            LA  L GS LIEASAGTGKTFTI+ LY+RLVLG G       + LLPP +LVVTFT+AAT
Sbjct: 15   LALTLNGSALIEASAGTGKTFTIAILYVRLVLGQGQSPDSPLQNLLPPNLLVVTFTEAAT 74

Query: 69   KELRERIRTRLAEAARFFRD-----ETPAPDSLIAELRGQFSPE--QWSGCANRLDIAAQ 121
            KELR+RIRTRL +AA  F D       PA  +LI +LR +  P+   W  C  +L +AA+
Sbjct: 75   KELRDRIRTRLTQAAEVFSDAPDEPNPPAETALIYQLRDESYPDPASWPECRKKLLLAAE 134

Query: 122  WMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLEVDHSNLLGEVLRDYWRLFCYPMQGDA 181
            WMDEAAVSTIHS+C RML EHAFDSGSLF  TLE D S LL EV RDYWR F YP+    
Sbjct: 135  WMDEAAVSTIHSFCNRMLSEHAFDSGSLFKLTLETDQSELLDEVARDYWRTFVYPLPPAL 194

Query: 182  LNWVRSHWGGPAALLSRVRGLFASERDSAEGKEPA-ELITECLQARRDALLELKA-PWRQ 239
            ++   SHW  P  L   VR L           E   + I + +  R +    LKA PW Q
Sbjct: 195  MDEALSHWKTPGDLRQGVRNLIDDPLSLGTPPESVHQAIDQVVHRRLEQSQSLKAHPWSQ 254

Query: 240  WAQELREICLQGVASKSVDGRKMQARYFEPWFEKICTWAEDDGL--EQLDIGTGFNRLTP 297
            W  ++ E+      SK + G    A   + W + +  WAE D L  E++D   GF   TP
Sbjct: 255  WRDDVIELLNDLNKSKRLHGASKNAM-IKVW-DLLVAWAESDDLLPEKIDSAAGFKNQTP 312

Query: 298  DGMAEAWKGQ--APSHPGLDAMSGLKASLDALPTPDAAVLKHAAQWVGARFEEEKRRRAE 355
            +G+ +  KG   AP HP  DA+  L       P+  + +L+HA+ W+  R E EK++R+E
Sbjct: 313  EGLDKILKGDDSAPHHPAFDAIGALLDFSQNQPSAKSDILRHASHWMAERLESEKQKRSE 372

Query: 356  MGFDDMLLRLDAALRAEGGERLATLIREQFPVALIDEFQDTDPVQYWIFESIYRIEDNNP 415
            MGFDD+L RLD AL    G++LA  IR QFPVALIDEFQDTDPVQY IF+ IY +   + 
Sbjct: 373  MGFDDLLTRLDDALHGPRGDQLAATIRRQFPVALIDEFQDTDPVQYRIFDRIYNVSGGDS 432

Query: 416  ECGLFLIGDPKQAIYAFRGADIYTYLRARQATSGRLHTLGTNFRSSHGMVDAVNHVFQRA 475
               L +IGDPKQAIY FRGADIYTYL+ARQ    R +TLG NFRS+  MV AVN VF  +
Sbjct: 433  GTCLLMIGDPKQAIYGFRGADIYTYLQARQGVKERTYTLGKNFRSAKTMVAAVNRVFDHS 492

Query: 476  EAREQGRGAFLFREKNGENPVPFLPVESQGRKESLQINGQAVPALNIWQLSS--EQPLSG 533
            +   +  GAFLF  K   +P+PF  V++ G K S  ING+  P+L  W   S  E+ ++ 
Sbjct: 493  DQNSRD-GAFLFG-KGDTSPLPFQGVDANGTKRSWSINGEVQPSLVFWTHESGEEEGVAK 550

Query: 534  VVYRQQLAAACASEITALLNGGQQGRAGFVR--GAEDLQGLLPADIAILVRDGKEAQAVR 591
               R  +A  CASEI  LL  GQ G+AGF       DL+ + P DIAILV +  EA AVR
Sbjct: 551  GAARADMAETCASEIARLLTLGQAGQAGFALPDNPSDLEPVAPKDIAILVNNRNEASAVR 610

Query: 592  NELSVRGVRSVYLSDKDSVFAAQEAHDLLSWLKACAEPDVERPLRAALASITLNLSLTEL 651
            + L  R ++SVYLSD+DSV  ++E+ ++L WL+A AEP     +RAALA+ TL  S   +
Sbjct: 611  DALGQRRIKSVYLSDRDSVLTSRESQEILCWLRAFAEPRQLAYIRAALATPTLGQSWHAM 670

Query: 652  ERLNQDELAWEKRVMQFREYRVIWRSQGILPMLRRLLHDFELPQALIARSDGERILTNLL 711
             +L  DEL  E+ + +F  Y+  W+ QG+LPMLR  L DFE+P  L+ R DGER LT++L
Sbjct: 671  NQLLTDELVLEREIERFIGYQQQWQKQGVLPMLRTFLMDFEVPGQLLQRPDGERRLTDIL 730

Query: 712  HLSELLQQAAAELDGEQALIRHLSEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLE 771
            H++ELLQQ + +LDGE AL+ H ++ L  + +  E + LRLESD  LVKV+T+HKSKGLE
Sbjct: 731  HIAELLQQDSLQLDGEHALVHHYTQILRAADEEDEHRTLRLESDAGLVKVITVHKSKGLE 790

Query: 772  YPLVFLPFICSAKPVDGSRLPMHYHDANGQAQITLSPTPELIALADDERLAEDLRLLYVA 831
            YPLVFLPF  + +     +  + YH+  G+      P+P+ +A AD ERL ED+R  YVA
Sbjct: 791  YPLVFLPFGTAFRAQSEKQAFVRYHNEQGRLVTVFDPSPDDVARADRERLGEDIRKFYVA 850

Query: 832  LTRAQHACWLGVTDLKRGNNNSSVLHLSALGYLLGGGEKLVESTALKRWLEDLQQNCSAL 891
            LTRA+ A W+G   L            S LGYL+G   +    + +   L  L +  + +
Sbjct: 851  LTRARFATWVGTAALDNWQQ-------SGLGYLIGSEGQ----SRISDCLGKLAEGRAEI 899

Query: 892  SYGEMPEATTERFLPPRNEATLLAPLIPKRKAAENWWIASYSALRIGDSLSAG--SDEAP 949
                +P+     +  P  EA L   ++  R+A E+WWIASYS++        G       
Sbjct: 900  RITPLPDPDDTHYHGPAPEA-LGPAMVSSREAREDWWIASYSSIEYTGMTGTGIAFTGEV 958

Query: 950  ESPQAQKLFDDERLDPDAPREVLASGGDIHRFPRGPNPGTFLHGLLEWAGDEGF---AAD 1006
            E  Q Q L ++  LD +     +A+  + H FP+G  PGTFLH LLEW   +GF     +
Sbjct: 959  EDAQTQNLLEESTLDEEENPAQMANQRNQHNFPKGAGPGTFLHELLEWCTQQGFQRVVDN 1018

Query: 1007 PKSIENAIARRCNRRGWEGWINTLSDWLQHLLQAPL---RIGTEQPPVVFEQLTEYRVEM 1063
            P  +   + RRC  RGW  W+  L  WL  L+  PL   R G E   V    LT  R E+
Sbjct: 1019 PPLLHEQLTRRCGTRGWNEWVEPLVRWLLALISKPLSLDRAGAE--TVCLSDLTTLRPEL 1076

Query: 1064 EFWFASHKVDVLKLDELVRQYTHAGASRVVAEPVLLNGMFKGFIDLTFEHAGRYYVADYK 1123
            EFWF S  V + KLDELV  +T   A R   E    NGM KGFIDL FEH GRYYV DYK
Sbjct: 1077 EFWFESRNVSIRKLDELVTAHTLNRADRPRVEETRFNGMLKGFIDLVFEHNGRYYVLDYK 1136

Query: 1124 SNWLGADDSAYTEQAMEQSMLDHRYDLQYVLYLLALHRQLKARLADYDYDRHMGGALYLF 1183
            SN LG D+SAYT+QAM  ++LD RYDLQYVLYLLALHR LKARL DYDYDRH+GGA+YLF
Sbjct: 1137 SNTLGEDNSAYTDQAMGNAILDKRYDLQYVLYLLALHRLLKARLPDYDYDRHIGGAVYLF 1196

Query: 1184 LRGTRAPGQGVYFTRPPRELIERLDRLFQGK 1214
            LRG  +   G +  +PPR LIE+LD LF G+
Sbjct: 1197 LRGIDSSTGGAFTDKPPRALIEQLDALFDGE 1227