Pairwise Alignments

Query, 695 a.a., exodeoxyribonuclease V subunit alpha from Pseudomonas fluorescens FW300-N2E3

Subject, 1539 a.a., TraA1 conjugal transfer protein from Sinorhizobium meliloti 1021

 Score = 48.5 bits (114), Expect = 2e-09
 Identities = 49/147 (33%), Positives = 63/147 (42%), Gaps = 30/147 (20%)

Query: 217 AFSIVTGGPGTGKTTTVVRLLALLQAPAVEAGKPLRIRLAAPTGKAAARLTESISQQVRT 276
           A + V G  G GK+T       L  A A   G+  R+  AA  GKAA  L +S   + RT
Sbjct: 407 AIAAVVGLAGAGKSTL------LAAARAAWEGEGRRVIGAALAGKAAEGLEDSSGIRSRT 460

Query: 277 LQVAESVRDKIPSDVTTVHRLLGSRPGTRHFRHHAGNRLPLDVLVVDEASMIDLEMMANL 336
           L   E                L    G              DVLV+DEA M+  + MA +
Sbjct: 461 LASWE----------------LAWENGREQLNRG-------DVLVIDEAGMVSSQQMARV 497

Query: 337 LDAL-PTHARLVLLGDKDQLASVEAGA 362
           L A+    A+ VL+GD  QL  +EAGA
Sbjct: 498 LKAVEDAGAKAVLVGDAMQLQPIEAGA 524



 Score = 28.5 bits (62), Expect = 0.003
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 618 DVETVYAMTVHKSQGSEFAHTALILPDALNPVLTKELIYTGITRAKN 664
           +V+  YA T+HKSQGS    T ++    ++  LT    Y  +TR ++
Sbjct: 724 NVDHGYAATIHKSQGSTVDRTFVLATGMMDQHLT----YVAMTRHRD 766