Pairwise Alignments

Query, 340 a.a., 23S rRNA methyltransferase from Pseudomonas fluorescens FW300-N2E3

Subject, 330 a.a., Predicted SAM-dependent methyltransferase from Pseudomonas stutzeri RCH2

 Score =  440 bits (1131), Expect = e-128
 Identities = 212/328 (64%), Positives = 253/328 (77%), Gaps = 5/328 (1%)

Query: 11  RQKPKPAT-PAKAVEPREKASLHPRNRHQGRYDFPALIKTTPELAKFVIINPYGKESIDF 69
           R+ P P   PA+A     KA LHPRNRH GRYDFPALI   PELA+ VIINPYGK+SIDF
Sbjct: 3   RKSPSPTPQPARA---EAKAVLHPRNRHTGRYDFPALIAGCPELAEHVIINPYGKQSIDF 59

Query: 70  ASPDAVRVFNRALLKSFYGIAHWDIPADYLCPPVPGRADYVHFLADLLASVNDGEIPRGA 129
           A+PDAVRVFNRALL+ FYGI HWDIP  YLCPPVPGRADY+H LADLLA  +   IPRG 
Sbjct: 60  ANPDAVRVFNRALLRQFYGIQHWDIPPGYLCPPVPGRADYLHGLADLLAQNDASAIPRGT 119

Query: 130 PVKVLDIGMGANCVYPLIGYSDYRWHFLGSEIDPTAVAAAKAIVQSNGLNKAIQLRQQSN 189
            +  LDIG GANC+YPLIG+ +Y W F GS+ID TA+A+A  IV +NGL KAI+LRQQ+ 
Sbjct: 120 AIHALDIGTGANCIYPLIGHREYGWRFTGSDIDATALASAHTIVSANGLAKAIELRQQAA 179

Query: 190 PKHILLGLLEPGERFDLTMCNPPFHASMDEATKGSERKWRALGRADPKRKLPVLNFGGQS 249
           PKHI  G++ P +RFDLT+CNPPFHAS  EA+ GS+RKWR LG+ DP RKLP LNFGGQ+
Sbjct: 180 PKHIFKGMVLPEDRFDLTLCNPPFHASQAEASSGSQRKWRNLGKLDPSRKLPALNFGGQA 239

Query: 250 AELWCEGGEARFVTQLIAESAHFQHKVLWFSTLVSKASNLPAIQTALKKAGVLESQVVEM 309
           AELWCEGGEA FV ++  ESA F  +V WFSTLVSK +N+  ++  LK+ G  +   ++M
Sbjct: 240 AELWCEGGEAAFVARMAEESALFAGQVYWFSTLVSKGANVAPLEARLKRLGARQVHTLDM 299

Query: 310 SQGQKQSRFVAWTFQTKSEQQVWR-ERW 336
           +QGQK+SRFVAWTF T++EQ  WR ERW
Sbjct: 300 AQGQKKSRFVAWTFLTEAEQATWRAERW 327