Pairwise Alignments

Query, 372 a.a., LPS export ABC transporter permease LptF from Pseudomonas fluorescens FW300-N2E3

Subject, 373 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

 Score =  547 bits (1410), Expect = e-160
 Identities = 274/373 (73%), Positives = 323/373 (86%), Gaps = 1/373 (0%)

Query: 1   LIVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKFLAQAASGALDPGSLFLIMGFRLPGFL 60
           +IVFRYLSRE+L+T+SAVSAVLLVIIMSGRFIK+LAQAA G LDPG L LIMGFRLPGFL
Sbjct: 1   MIVFRYLSRELLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLLLIMGFRLPGFL 60

Query: 61  QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTLFPAALVAVIVAWLSLSL 120
           QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQ+RLL  ++ PAALVA +V WLSL L
Sbjct: 61  QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQRRLLAYSMAPAALVAAMVGWLSLGL 120

Query: 121 APQGANQFQLLLNKQDAMTEFDTLVPGRFQALRDGSRVTYTEQLSDDRINLGGVFISEKR 180
           APQG  +   +LN+QD++TEFDTLVPGRFQ LR GSRVTYT +LS DR  LGGVFISE  
Sbjct: 121 APQGIAEVDRILNQQDSLTEFDTLVPGRFQTLRGGSRVTYTRELSADRSELGGVFISETN 180

Query: 181 LSADQ-KDRGISVLVAEKGRQEIKEDGNRYLILDNGYRYDGQPGLADYRAIKYDTYGVLL 239
           +S    K+ G+SVLVAE GRQEI+ DG+RYLIL+NGYRYDG PG ADYRAI+YDTYGVLL
Sbjct: 181 VSRQTGKESGLSVLVAESGRQEIQPDGSRYLILENGYRYDGNPGQADYRAIQYDTYGVLL 240

Query: 240 PKPDVSDEVTDRDAMPTRTLLDNPDIRARAELEWRVSLPLLVFIVTLMAVPLSRVNPRQG 299
           PKP+VS E+++R+AMPTR L+ + ++R + EL+WR+SLPLLVF+VT++AVPL++VNPRQG
Sbjct: 241 PKPEVSMELSEREAMPTRELVGSDNVRHQTELQWRLSLPLLVFVVTVLAVPLAKVNPRQG 300

Query: 300 RFLKLLPAILLYMAYLTILIAARGALEKGKIPPALGLWWVHAIFLAIGLGLLYWEPLRLK 359
           RFLKLLPAILLYM YL +LIA RGAL+KG++P ALGLWWVH +FLAIGL +L+WEP+RL+
Sbjct: 301 RFLKLLPAILLYMTYLALLIAVRGALDKGRLPMALGLWWVHGLFLAIGLLMLFWEPIRLR 360

Query: 360 MASRRSALEVTRG 372
           M+ RR   EV  G
Sbjct: 361 MSKRRMQREVAHG 373