Pairwise Alignments

Query, 372 a.a., LPS export ABC transporter permease LptF from Pseudomonas fluorescens FW300-N2E3

Subject, 396 a.a., permease YjgP/YjgQ (NCBI) from Rhodospirillum rubrum S1H

 Score = 84.0 bits (206), Expect = 7e-21
 Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 33/333 (9%)

Query: 5   RYLSREVLLTLSAVSAVLLVIIMSGRFIKFLAQAASGALDPGSLFLIMGFRLPGFLQLIL 64
           RY+ R +L+ L+  S  L+V+I     +KFL    +  L   +   +    +PGFL + +
Sbjct: 8   RYILRNLLVGLAVGSVALIVLIWLINSLKFLDWFVNKGLSVATFLRLTLLLMPGFLTVFI 67

Query: 65  PLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTLFPAALVAVIVAWLSLSLAPQG 124
           P+ LF  +L  Y RL  + E+ V+ A GM   +L    L   A++  +  WL+LS+ P  
Sbjct: 68  PIALFAVVLFTYNRLAADRELIVMRAAGMGPWQLARPALALCAVLTGVGYWLTLSVVPAM 127

Query: 125 ANQFQLLLNKQDAMTEFDTLV--PGRFQALRDGSRVTYTEQLSDDRINLGGVFISEKRLS 182
              F+ +  K +   E  +LV   G+F  ++DG  V   E+  D R+      I      
Sbjct: 128 EGAFEAI--KYEVRGEVSSLVIKEGQFNQMKDGLIVYAGERAKDGRL------IDLMIHD 179

Query: 183 ADQKDRGISVLVAEKGRQEIKEDGNRYLILDNGYRYDGQPGLADYRAIKYDTYGVLLPKP 242
              K   ++V+ AE G    + +G R L++ NG R +          + +D+Y V L   
Sbjct: 180 TTGKTSDLTVM-AESGALVREGEGARILLI-NGNRQERNRQTGKVNFLYFDSYAVDLGGK 237

Query: 243 DVSDEVTDRD--AMPTRTLLD-------NPDI----------RARAELEWRVSLPL--LV 281
             S E+  R+    P   L+        +PD           R R E   R+  PL  + 
Sbjct: 238 AASTEMRFREERERPLSELISLKAGDRIDPDYPFTYEERHIRRMRMEAHLRLLRPLAHIG 297

Query: 282 FIVTLMAVPLSRVNPRQGRFLKLLPAILLYMAY 314
           F++  +A  L+    R+G   +++ A+ L + +
Sbjct: 298 FLLIGLAAVLTGEFDRRGGNKRVILAVALVVLF 330