Pairwise Alignments

Query, 353 a.a., LPS export ABC transporter permease LptG from Pseudomonas fluorescens FW300-N2E3

Subject, 352 a.a., permease YjgP/YjgQ family protein (RefSeq) from Shewanella loihica PV-4

 Score =  234 bits (596), Expect = 3e-66
 Identities = 123/349 (35%), Positives = 199/349 (57%), Gaps = 1/349 (0%)

Query: 4   LDRYIGGSVFMAILAVLGIILGLATLFAFIDEMSDV-TDTYTLTDVLSYVALTAPRRVYD 62
           LD YI   +       L ++ GL+ +  ++D++  V   TYT+ D   YV    PR +  
Sbjct: 4   LDLYIARVLLSTSALCLLVLTGLSGIIKWVDQIRLVGRGTYTMVDAGIYVLFLIPRDIEM 63

Query: 63  MLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLAGVLVGEYVAP 122
             PMA L+G LIG+G LAS+SEL +M++AG+S  +I  + MK  + LML  + +GE+ AP
Sbjct: 64  FFPMAVLLGALIGMGMLASNSELVVMQSAGLSRFQITLSAMKTAVPLMLLVMALGEWGAP 123

Query: 123 AAENVAQANRSLAQGIGDAQSAKHGMWHRQGDEFIHINSVQPDGILYGVTRYRFDRERHM 182
            AE   +  +++    G    +  G+W + GD F++I  ++    L+ +  Y FD + ++
Sbjct: 124 VAERHGKELQAVKLSGGSLFKSSRGIWAKDGDLFVNIGEIEDINSLHNIVLYEFDDKLNL 183

Query: 183 LTSSFSKRAQFETDHWQLNDVTTTVFHDGSTEVVTAPQERWEVPLSPQLLNTVIMAPESL 242
           + +  ++R  +  DHW+L DV  T        +      RWE  L+P  L+ V + PE+L
Sbjct: 184 VGTIEARRGVYSKDHWRLLDVRQTKITPEQVSLTDLTLYRWESTLTPDKLSVVSVKPEAL 243

Query: 243 SISGLWGYIHYLADQGLNNGRYWLAFWVKVLQPLVTVALVLMAISFIFGPLRSVTLGQRV 302
           SI GL  Y+ YL     ++GRY LA W K++QP+    ++L+A+SF+FGPLR+VT+G RV
Sbjct: 244 SIQGLVDYLEYLRVNNQDSGRYELALWRKIMQPITVAVMMLVALSFVFGPLRTVTMGARV 303

Query: 303 FTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPAGICGVAGLWMLRR 351
             GV+ GF+F I  ++ GP +LV+G   +   ++P  I   A ++ +RR
Sbjct: 304 LLGVVAGFSFYICNEIFGPMTLVYGLPAVLGAVMPPLIFSSAAIYYIRR 352