Pairwise Alignments

Query, 353 a.a., LPS export ABC transporter permease LptG from Pseudomonas fluorescens FW300-N2E3

Subject, 365 a.a., permease YjgP/YjgQ family protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 89/361 (24%), Positives = 150/361 (41%), Gaps = 25/361 (6%)

Query: 4   LDRYIGGSVFMAILAVLGIILGLATLFAFIDEMSDVT-DTYTLTDVLSYVALTAPRRVYD 62
           L  Y      M+ L++LGI  GL  +   ++ +  ++ D + L +  +   L  P  +Y+
Sbjct: 3   LQWYFARRFVMSFLSMLGIFAGLIWMTDTVESLRSLSSDDFGLQEAAALALLQLPATIYE 62

Query: 63  MLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLML---AGVLVGEY 119
           ++P+  ++  +     +A +SEL + RAAG S  R   +++ P++V  L    G+ V   
Sbjct: 63  VIPLIMVLATITLFLKMARTSELIVTRAAGRSAIR---SLIAPVIVAGLIGGIGISVLNP 119

Query: 120 VAPAAENVAQANRSLAQGIGDAQSA--KHGMWHRQ----GDEFIHINSVQPDG-ILYGVT 172
           +  A   +A+  R   +G   +  A    G+W RQ    G   IH       G ILY VT
Sbjct: 120 IVAATSRIAEETRDEVRGRATSVLALSSEGLWLRQAAPEGQIVIHAAGASLGGTILYDVT 179

Query: 173 RYRFDRERHMLTSSFSKRAQFETDHWQLNDVTTTVFHDGSTEVVTAPQERW-EVP--LSP 229
             RFD +   +    + RA+     W L  V                   W +VP  L+ 
Sbjct: 180 FLRFDADALPIERVAASRAELVPGAWDLTGVKVWDLTGRLNPEAGVRTSAWMQVPSDLTL 239

Query: 230 QLLNTVIMAPESLSISGLWGYIHYLADQGLN--NGRYWLAFWVKVLQPLVTVALVLMAIS 287
             +      P ++ I  L  +I  L   G    + R WL    ++  P+  VA+VL+  +
Sbjct: 240 DQIRDSFGDPSAIPIWELPAFIDQLEAAGFAALSHRVWL--HTELASPVFLVAMVLIGAA 297

Query: 288 FIFGPLRSVTLGQRVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPAGICGVAGLW 347
           F     R    G  V   VL+GF+    +      + V G +    VL  A    +AG++
Sbjct: 298 FTMRHTRFGRTGLMVLFAVLLGFSMYFLKSF----AQVLGEAGKIPVLAAAWFPPLAGVF 353

Query: 348 M 348
           +
Sbjct: 354 L 354