Pairwise Alignments

Query, 486 a.a., murein transglycosylase from Pseudomonas fluorescens FW300-N2E3

Subject, 471 a.a., Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein from Pseudomonas stutzeri RCH2

 Score =  125 bits (314), Expect = 3e-33
 Identities = 118/409 (28%), Positives = 175/409 (42%), Gaps = 46/409 (11%)

Query: 29  DKPNTLERVKEDGVLRVVTRNSPATYFQDRNGETGFEYELVKRFADDLG--------VKL 80
           DK   L  ++  GVLRV+   S  +  + +    G EY  ++ F   L         + L
Sbjct: 34  DKVRDLAEIRRSGVLRVLVNQSRNSSGEIKGEAIGVEYARLRAFEQHLNRDAASGKSITL 93

Query: 81  KIETADNLDDLYGQLGKPGGPVLAA------AGLVGSDKRKQQVRFSHSYLEVTPQIIYR 134
           KI      D L G L +  G ++A       AG+ G  + +  VR      +V+  ++ R
Sbjct: 94  KIIPKAK-DQLLGALQRGEGDLVAPGELLPLAGMKGISRSRPVVR------DVSLVLVGR 146

Query: 135 NGQSRPTSAADLVGKTIMVLKGSTHADQLAALKK-----KYPGIEYEESD-AVEVVDLLR 188
            G  R      L G+++ +  GS     LA L K     K   I  E  D  + V D+L 
Sbjct: 147 QGGPRYQRLEQLSGRSLALPPGSAAGPALARLNKQLMERKLAPIVVEWVDPTLAVEDVLE 206

Query: 189 MVDEGQIDLTLVDSNEVAMNQVYFTNARVA--FDLGDASNQSWAVAAGDDNSLLNE---- 242
           MV  G    T+V+              R+     LGD ++  W V    D S+L      
Sbjct: 207 MVQAGVYPATVVEQTIAQRWAKVMPKLRIEQNLSLGDKASMHWFVRK--DASMLRASADR 264

Query: 243 -INDFLDKAQKNGTLQRLKDRYYGHVDVLGYMGAYTFAEHLQQRLPKYEKHFKASAKEEK 301
            + DF   A ++   +R+  R Y     L  +G        +QRL K     +  A++ +
Sbjct: 265 FLKDFALPANQDAAFERVYRRLYKVQYPLDRLG--------RQRLEKVRPTLQRYAEQIE 316

Query: 302 VDWRLLAAIGYQESLWQPAVTSKTGVRGLMMLTQNTAQAMGVSNRLDAKQSIMGGAKYLA 361
           +DW  LAA+ ++ES   PA     G  GLM +T  TA+AMGVSN      ++   AKYLA
Sbjct: 317 LDWLNLAALAFKESTLNPAAKGAGGATGLMQVTPATARAMGVSNIQQLDNNVQASAKYLA 376

Query: 362 YTKDQ--LDDSIQEPDRTWFALAAYNVGSGHLDDARKLAAKEGLNPDKW 408
             +        + E +R  F LAAYN+G   +   R  A + GLNPD+W
Sbjct: 377 NIRRNHFASPRLNERERMAFILAAYNLGPQRVQSMRAEARRRGLNPDQW 425