Pairwise Alignments

Query, 838 a.a., N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) (from data) from Pseudomonas fluorescens FW300-N2E3

Subject, 844 a.a., PTS system, glucose-specific IIA component / Phosphotransferase system, phosphocarrier protein HPr / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) from Pseudomonas fluorescens FW300-N1B4

 Score =  641 bits (1654), Expect = 0.0
 Identities = 364/831 (43%), Positives = 505/831 (60%), Gaps = 6/831 (0%)

Query: 6   KDLTLSAPLSGPVLTLAKVPDPVFASGAMGDGIAIDPLNNTLHAPCAGVVVHVARTGHAV 65
           + L L APLSG ++ L +VPD VF+S  +GDG+ IDP + TL AP  GV+ +V  +GHAV
Sbjct: 5   QQLQLLAPLSGVLMPLDQVPDQVFSSRVIGDGLCIDPTSQTLCAPLTGVISNVQVSGHAV 64

Query: 66  TLRADNGAELLLHLGLDTVELQGEGFSMLVKEGTRVSNGQALLRFDLDQVAQGCKSLVSL 125
           ++  DNG ++L+H+GLDTV L G+GF+ LV+EG RV  GQAL+ FD D +A   +SL++L
Sbjct: 65  SITDDNGVQVLMHIGLDTVNLAGKGFTRLVEEGQRVIVGQALIEFDADYIALHARSLLTL 124

Query: 126 LVLTNSEDFQVLPITLKSVKVGEPLLHIVPRTTHSAQVEADSSGAEVHGHIRIIHRGGLH 185
           +++ + E F  L      V+ G+PLL + P    + +  A    A     + + +  GLH
Sbjct: 125 MLVVSGEPFTWLAPETGVVESGQPLLSLNPSEGAADEGIAQEGEALFSKPVTLPNTNGLH 184

Query: 186 ARPAALIRQTAHLFNSKSQLHFAGKSASCDSLIGLMGLGIGEQDEVQVSCKGADAKAALQ 245
           ARPAA+  Q A  F +   LH    SA+  SL+ +M L     D +QVS  GADA+ A++
Sbjct: 185 ARPAAVFAQAAKGFAASICLHKQQDSANAKSLVAIMALQTAHGDVLQVSAAGADAEVAIK 244

Query: 246 ALLNALSTAVNDDSHAAAPTPIAQRTRTAEAGVLNGVCAAPGLVGGPLFQLAAIPLPEDT 305
            L   L+    +     A        + +   VL GVCA+PG   G + Q+A   L    
Sbjct: 245 TLAELLAAGCGEAVTLMAEVETVA-AQVSSLTVLRGVCASPGAAFGQVVQIAEQTLEVSE 303

Query: 306 GKHNAEEQLQALDRALEQVRSEIRETLSHAKKHKHTEEEQIFAAHLALLEDPALLEAAIQ 365
              + + + + L RAL +    +++    A      +   IF AH  LLEDP LL+ A+ 
Sbjct: 304 SGVSPQVEREHLSRALAKAVLALQQLRDKATGDAQAD---IFKAHQELLEDPGLLDQALA 360

Query: 366 SIDQGSAATHAWSQSIEAQCEVLQQLGNPLLAERANDLRDLRQRVLRALLG-QDWHYDVP 424
            ID G +A  AW  + E+   + ++LGN LLAERA DL D+ QRVL+ +LG +D   ++P
Sbjct: 361 LIDAGKSAGFAWRAATESTATLFKKLGNALLAERAADLADVGQRVLKLILGVEDRAMELP 420

Query: 425 AGAIVAAHELTPSDLLQLSQQGVAGLCMAEGGATSHVAILARGKGLPCLVALSASLLQQP 484
            GAI+ A +LTPS    L  + V G     GGATSHVAILAR  GLP +  L   +L   
Sbjct: 421 DGAILIAEQLTPSQTAGLDTRKVLGFATVGGGATSHVAILARASGLPAICGLPVQVLTLI 480

Query: 485 QGQSVVLDADGGRLELTPDSQRLEQVAQAQREHLQRRERQQAQAHTPAHTRDGLRIEVAA 544
            G  V+LDAD G L+L P+   +EQ+   ++   QR++ + A A   A TRDG  +E+ A
Sbjct: 481 NGTRVLLDADKGELQLDPELAAIEQLQANRQLQKQRQQYELANAGLAARTRDGHHVEITA 540

Query: 545 NVASSNEAADALKGGADGVGLLRTEFLFVDRQTAPDEQEQRQAYQAVLDAMGD-KSVIIR 603
           N+AS  EA  A+  G DGVGLLR+EFL++DR  AP   EQ   Y A+  A+G  +++++R
Sbjct: 541 NIASLAEAEQAMALGGDGVGLLRSEFLYLDRNHAPSHDEQASTYGAIARALGPARNLVVR 600

Query: 604 TIDVGGDKQLDYLPLPAEANPVLGLRGIRMAQVRPELLDQQLRALLQVSPLQRCRILLPM 663
           T+DVGGDK L Y+P+  E NP LG+RGIR+   RP+LL  Q +A+L  + L R  I+LPM
Sbjct: 601 TLDVGGDKPLAYVPMDRETNPFLGMRGIRLCLERPQLLRDQFKAILSSAGLARLHIMLPM 660

Query: 664 VTEVDELLYIRQRLDALCAELALTQRLELGVMIEVPAAALLAEQLAEHADFLSIGTNDLS 723
           VT++ EL   RQ L+     L LT+  +LG+MIEVPAAAL+A+  A   DF SIGTNDL+
Sbjct: 661 VTQLSELRLARQLLEEEALALGLTELPKLGIMIEVPAAALMADLFAPEVDFFSIGTNDLT 720

Query: 724 QYTLAMDRDHAGLAARVDALHPALLRLIAQTCIGAAKHQRWVGVCGALASDPLATPVLIG 783
           QYTLAMDRDH  LA++ D+ HP++LRLIA T   A  H +WVGVCGALAS+ LA P+L+G
Sbjct: 721 QYTLAMDRDHPRLASQADSFHPSVLRLIATTVKAAHAHGKWVGVCGALASEKLAVPLLLG 780

Query: 784 LGISELSVSPPQVGEIKERVRQLDAADCRRFSATLLNLSSATAVRHACHQH 834
           LG+ ELSVS P +  IK  VR++D  DC+  +  +L L SA  VR A  +H
Sbjct: 781 LGVDELSVSVPLIPAIKAAVREVDLLDCQAIAQQVLGLESAEQVREALRRH 831