Pairwise Alignments

Query, 278 a.a., mechanosensitive ion channel protein MscS from Pseudomonas fluorescens FW300-N2E3

Subject, 268 a.a., small-conductance mechanosensitive channel from Phaeobacter inhibens DSM 17395

 Score =  186 bits (472), Expect = 5e-52
 Identities = 94/239 (39%), Positives = 147/239 (61%), Gaps = 2/239 (0%)

Query: 31  AAITLAIGWWLINKLTHKVGKLL-ALRNADLALQGFMSSLANIILKVLLMVSVASMIGVE 89
           A + L +GW     ++  V + + A  + D  L  F +S    +L  +++V+V  + G+E
Sbjct: 21  ALVVLVVGWIAAGVISGAVRRRINATPHLDQTLGNFAASAVRWVLLAIVLVAVLGIFGIE 80

Query: 90  TTSFVAAIGAAGLAIGLALQGSLANFAGGVLILLFRPFRIGDVIEAQGITGTVDSIQIFH 149
            TS VA +GAA LAIGLALQG+L++ A GV++++FRP+++G  ++  G +GTV  + +F 
Sbjct: 81  ATSLVAMLGAATLAIGLALQGTLSDLAAGVMLVMFRPYKLGQYVDIGGTSGTVVDLNLFV 140

Query: 150 TLLRTGDNKTVIVPNGNLSNGIITNHNRQQTRKVVFDIAVNYDADLQKAREVLLELAK-D 208
           T L T DN  +I+PNG     IITN++   TR+V     ++Y      A+E++L+LA  D
Sbjct: 141 TELVTPDNVQIIIPNGQAWGAIITNYSAHDTRRVDMVFGIDYGDSADAAKEIILDLANAD 200

Query: 209 ERVLADPAPVAVVSTLGDSSITVSLRVWVKTADYWDVMFMFNEHARDRLKAAGIDIPYP 267
            RV+ADPAP   V+ LGDSS+ ++ R+W K ADYW++ F   +  ++     GI IPYP
Sbjct: 201 ARVMADPAPWVRVTNLGDSSVDLTARLWCKAADYWELKFAMTQAVKEAFDDKGISIPYP 259