Pairwise Alignments

Query, 278 a.a., mechanosensitive ion channel protein MscS from Pseudomonas fluorescens FW300-N2E3

Subject, 494 a.a., MscS Mechanosensitive ion channel (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  139 bits (349), Expect = 2e-37
 Identities = 73/215 (33%), Positives = 116/215 (53%), Gaps = 1/215 (0%)

Query: 55  LRNADLALQGFMSSLANIILKVLLMVSVASMIGVETTSFVAAIGAAGLAIGLALQGSLAN 114
           L N    LQ F++++   +   + ++ V S +GV+ T   A  G     +  A+Q +L+N
Sbjct: 231 LPNLSKLLQAFLATIVYWLTIAVGLMVVLSSLGVDITPLFALFGGGAFILAFAMQETLSN 290

Query: 115 FAGGVLILLFRPFRIGDVIEAQGITGTVDSIQIFHTLLRTGDNKTVIVPNGNLSNGIITN 174
            A GV+I++ RPF  GD ++  G+ GTV ++ I  T + T DN+ +++PN  +   +ITN
Sbjct: 291 LAAGVMIMINRPFDEGDYVDVAGLGGTVKNVSIVSTQIVTPDNQIIVIPNSKVWGDVITN 350

Query: 175 HNRQQTRKVVFDIAVNYDADLQKAREVLLELAKDE-RVLADPAPVAVVSTLGDSSITVSL 233
                TR+V     + Y   +Q+A+ VL E+      VL DPAPV  V+ L DS++   +
Sbjct: 351 VTASDTRRVDMVFGIGYGDSIQEAQAVLEEVVSGHPLVLKDPAPVIRVNELADSAVNFIV 410

Query: 234 RVWVKTADYWDVMFMFNEHARDRLKAAGIDIPYPQ 268
           R W KT DYW V +      ++   A  I IP+PQ
Sbjct: 411 RPWTKTTDYWAVYWDLQRAVKEAFDAKDISIPFPQ 445