Pairwise Alignments

Query, 172 a.a., RNA polymerase subunit sigma-24 from Pseudomonas fluorescens FW300-N2E3

Subject, 173 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score = 58.5 bits (140), Expect = 6e-14
 Identities = 44/146 (30%), Positives = 79/146 (54%), Gaps = 16/146 (10%)

Query: 23  RMVNNHSTAEDLLQETYLRVTRALSERAI-DHLEPFVFQTARNLALDHL-----RARRIQ 76
           R   + S A D++Q+T++R   A  E A+ D++  ++++ A NLA+DHL     RAR + 
Sbjct: 27  RRTGSPSLAADVVQDTWVRAASA--EIAMPDNVRAYLYRMAANLAIDHLRRDGARARGLC 84

Query: 77  SRTMLEDVPLDVVQNIAAPLSSAEDAAHAEQLLERLNISLSQLTPRQQQIFILSRLHGHS 136
             T+LED+P       A P  + +    A Q L  L+ ++++L  + + +F+L R  G +
Sbjct: 85  EETLLEDIP------SAEP--AVDRVVAARQELAILSRAVAELPEKCRIVFLLYRGRGLT 136

Query: 137 YLEIAEQLSVSLSTVQKDLKLIMAIC 162
             ++A +L +S   V+K +   M  C
Sbjct: 137 MKQVAARLGISEKAVEKHIARAMVHC 162