Pairwise Alignments

Query, 172 a.a., RNA polymerase subunit sigma-24 from Pseudomonas fluorescens FW300-N2E3

Subject, 165 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score = 76.3 bits (186), Expect = 3e-19
 Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 8   HVFLAQRVSLLRTLERMVNNHSTAEDLLQETYLRVTRALSERAIDHLEPFVFQTARNLAL 67
           H++L     L   L + V     A +L QET+LR+  +  + AI +   F+++ A NLA+
Sbjct: 9   HLYLQHVAELRHYLAQRVACREVARELAQETFLRMMLSDGKDAIRNPRAFLYRIAANLAV 68

Query: 68  DHLRARRIQSRTMLEDVPLDVVQNIAAPLSSAEDAAHAEQLLERLNISLSQLTPRQQQIF 127
           DH RA   + R +L   PL+     A P    E  A A Q L RL  ++ QL PR +++F
Sbjct: 69  DHYRAEAGRPREIL---PLEDCAEQACPRPGPEQVASARQTLARLAAAVEQLPPRCREVF 125

Query: 128 ILSRLHGHSYLEIAEQLSVSLSTVQKDL 155
           +  +  G    ++A +  +S++ ++K L
Sbjct: 126 LRHKFDGCRQADLAREYGISVNAIEKHL 153