Pairwise Alignments

Query, 566 a.a., long-chain fatty acid--CoA ligase from Pseudomonas fluorescens FW300-N2E3

Subject, 562 a.a., long-chain-fatty-acid--CoA ligase FadD2 from Pseudomonas sp. BP01

 Score =  697 bits (1799), Expect = 0.0
 Identities = 348/561 (62%), Positives = 428/561 (76%), Gaps = 9/561 (1%)

Query: 1   MIEDFWKDKYPAGIAAEINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTLTYGELYELSG 60
           M  DFW DK PAG+ + I+ + Y ++  V ++SC+RFA++PAFSNLG TL Y EL   S 
Sbjct: 1   MQADFWNDKRPAGVPSTIDINAYTSVVEVFERSCKRFADRPAFSNLGVTLNYAELERHSA 60

Query: 61  AFAAYLQQHTDLQPGDRIAVQLPNLLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFND 120
           AFAA+LQQHTDL+PGDRIAVQ+PN+LQYPIAVFGA+RAGLIVVNTNPLYT REM HQF D
Sbjct: 61  AFAAWLQQHTDLKPGDRIAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKD 120

Query: 121 SGAKALVCLANMAHLAEAVVPKTGVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH 180
           SGA+ALV L       + V+P TG++++I  ++ DLLP  K  LIN+V+  +KKMVPAY 
Sbjct: 121 SGARALVYLNMFGKRVQEVLPDTGIEYLIEAKMGDLLPAAKGWLINTVVDKLKKMVPAYR 180

Query: 181 LPKAVKFNDVLSKGHGQPVTEANPASSDVAVLQYTGGTTGVAKGAMLTHRNLVANMMQCR 240
           LP+A+ F  VL  G  Q       +  D+AVLQYTGGTTG+AKGAMLTH NLVANM+Q  
Sbjct: 181 LPQAISFKQVLRLGREQSPKPVPLSLDDIAVLQYTGGTTGLAKGAMLTHANLVANMLQVL 240

Query: 241 ALMGSN-------LNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMV 293
           A    +       L +G E++I PLPLYHIYAFT +CM MM+ GNHN+LI+NPRD+P  +
Sbjct: 241 ACFSQHGPDGQKLLKDGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFI 300

Query: 294 KELSKWKFSGFVGLNTLFVALCNNEAFRKLDFSGLKITLSGGMALQLAAAERWKAVTGCA 353
           KEL KW+FS  +GLNTLFVAL ++  FR+LDFS LK+T SGG AL  A AERW+A+TGC 
Sbjct: 301 KELGKWRFSALLGLNTLFVALMDHPGFRQLDFSALKVTNSGGTALVKATAERWEALTGCR 360

Query: 354 ICEGYGMTETSPVATVNP-NQNIQIGTIGIPVPSTLCKVIDDAGVEQPLGEIGELCVKGP 412
           I EGYG+TETSPVA+ NP  Q  ++GT+GIPV  T  KVIDD G E PLGE GELC+KGP
Sbjct: 361 IVEGYGLTETSPVASTNPYGQLARLGTVGIPVAGTAFKVIDDDGNELPLGERGELCIKGP 420

Query: 413 QVMKGYWQRQEATDEILDSEGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELE 472
           QVMKGYWQ+ EAT + LD++GW KTGDIA+I PDG+ RIVDRKKDMI+VSGFNVYPNE+E
Sbjct: 421 QVMKGYWQQPEATAQALDADGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIE 480

Query: 473 DVLATLPGVLQCAAIGVPDEKSGEAIKIFIVAKPGVTLTKEQVMTHMRANVTGYKVPRAI 532
           DV+   P V  CAAIGVPDE+SGEA+K+F+V + G  L+ E++  + +AN TGYKVP+ I
Sbjct: 481 DVVMGHPKVANCAAIGVPDERSGEAVKLFVVPREG-GLSVEELKAYCKANFTGYKVPKHI 539

Query: 533 EFRDALPTTNVGKILRRELRD 553
             R++LP T VGKILRRELRD
Sbjct: 540 VLRESLPMTPVGKILRRELRD 560