Pairwise Alignments

Query, 566 a.a., long-chain fatty acid--CoA ligase from Pseudomonas fluorescens FW300-N2E3

Subject, 557 a.a., long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  592 bits (1526), Expect = e-173
 Identities = 293/550 (53%), Positives = 391/550 (71%), Gaps = 2/550 (0%)

Query: 6   WKDKYPAGIAAEINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTLTYGELYELSGAFAAY 65
           W    P  + AEIN D+Y ++  + + +  ++A++PAF N+G TLTY +L E S AFAAY
Sbjct: 5   WIRHLPKDVPAEINVDQYSSLIDMFETAVAKYADQPAFINMGATLTYRKLEERSRAFAAY 64

Query: 66  LQQHTDLQPGDRIAVQLPNLLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125
           LQ    LQ GDR+A+ +PNLLQYPIA+FG +RAG++VVN NPLYT RE++HQ  DSGAKA
Sbjct: 65  LQNELKLQKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELKHQLIDSGAKA 124

Query: 126 LVCLANMAHLAEAVVPKTGVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYHLPKAV 185
           +V ++N A   E VV +T VK VI+T + DLL   KR L+N V+KY+KK+VP Y LP A+
Sbjct: 125 IVVVSNFARTLEEVVDQTPVKSVIITGLGDLLSAPKRTLVNFVVKYIKKLVPKYDLPHAL 184

Query: 186 KFNDVLSKGHGQPVTEANPASSDVAVLQYTGGTTGVAKGAMLTHRNLVANMMQCRALMGS 245
              + LS+G      +      D+A LQYTGGTTGV+KGAMLTH N+VAN++Q       
Sbjct: 185 SMRETLSRGRRMQYVKPVITGDDLAFLQYTGGTTGVSKGAMLTHSNVVANVLQANGAYSP 244

Query: 246 NLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWKFSGFV 305
            L +G E ++T LPLYHI+A T +C+  +  G+ N+LI+NPRD+P  V EL K+ F+   
Sbjct: 245 ALRDGSEFVVTALPLYHIFALTVNCLLFLHKGSQNLLITNPRDIPGFVAELKKYPFTALT 304

Query: 306 GLNTLFVALCNNEAFRKLDFSGLKITLSGGMALQLAAAERWKAVTGCAICEGYGMTETSP 365
           G+NTLF AL N+  F +LDFS LK+++ GGMA+Q A A++W+ +T   + EGYG+TE SP
Sbjct: 305 GVNTLFNALVNSSDFSELDFSRLKLSIGGGMAVQKAVADKWQNITKTRLLEGYGLTEASP 364

Query: 366 VATVNP-NQNIQIGTIGIPVPSTLCKVIDDAGVEQPLGEIGELCVKGPQVMKGYWQRQEA 424
           + T  P N +   G+IG P PSTL +V DDAG   P GE GEL  KGPQ+MKGYWQR E 
Sbjct: 365 LLTCCPYNLDGYNGSIGFPAPSTLIQVRDDAGNVLPQGETGELFGKGPQIMKGYWQRPEE 424

Query: 425 TDEILDSEGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPGVLQC 484
           T +++D++GWL TGDI  +   G+  IVDRKKDMILVSGFNV+PNE+E+V+A  P V++ 
Sbjct: 425 TAKVIDNDGWLATGDIGYMDEQGFFYIVDRKKDMILVSGFNVFPNEVEEVVALHPKVIEV 484

Query: 485 AAIGVPDEKSGEAIKIFIVAKPGVTLTKEQVMTHMRANVTGYKVPRAIEFRDALPTTNVG 544
           AA+GVP++ SGE +K+F+V K   +LT E ++ H R ++TGYKVP+ +EFRD LP TNVG
Sbjct: 485 AAVGVPNDASGELVKVFVV-KKDKSLTAEDIIKHCRVHLTGYKVPKLVEFRDELPKTNVG 543

Query: 545 KILRRELRDE 554
           KILRRELRDE
Sbjct: 544 KILRRELRDE 553