Pairwise Alignments

Query, 298 a.a., transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

Subject, 301 a.a., regulatory protein, LysR:LysR, substrate-binding protein from Klebsiella michiganensis M5al

 Score =  210 bits (535), Expect = 3e-59
 Identities = 123/296 (41%), Positives = 177/296 (59%), Gaps = 2/296 (0%)

Query: 1   MNKLELLRTFVRVSEMSSFTLAGESLGLPRSTVSEHVQALEALLGTRLLQRTTRKVQATQ 60
           M+KLE ++ ++ V +  SF  A E+LGLPRSTVS  ++ LEA LG +LLQRTTRK+  T 
Sbjct: 1   MDKLESMQVYMCVVDTHSFARAAEALGLPRSTVSRVIKTLEAYLGIQLLQRTTRKLSVTP 60

Query: 61  DGLVLYERSKDLLSHMDEIEGLFRQDEASLTGRIRIDMPNILARRVVMPRLPEFMARHPH 120
           DG   Y   K LL+ +  +E  F    A   GR ++ MP  LAR+ ++PRLP F+ +HP 
Sbjct: 61  DGRHYYAECKRLLAEIATLESSFPGRSARPRGRFKVGMPQSLARQSIIPRLPAFLQQHPG 120

Query: 121 LELEISSTDRRVDLLGEGFDCVLRVGAQPDQ-TVVARHLCDFAMVNCASPAYLQRYGVPQ 179
           LEL + S+D   D++ EG+DC +R G   D  T+VAR L +F+    ASPAY+  YG P+
Sbjct: 121 LELILCSSDSVEDIIQEGYDCAIRAGRIDDSTTLVARPLANFSWRVLASPAYIAAYGQPE 180

Query: 180 RLEDLAQHRLVHYVGVLGARSEGFVYEEEGTLHRMPMSGSVTVNNTDAYESACLGGFGLI 239
            L DL +HR V Y+     R+  + +      + + M  ++ V++TDAY  A + G GLI
Sbjct: 181 TLGDLERHRAVGYLDHRTGRTIEWFFTLAEEDYAIRMKETLVVDDTDAYIQAAIQGLGLI 240

Query: 240 QAPLMGMQSYLLSGELVAVLPQFNAPSMGVSLLYARQRHLPLRVRAFMDWLGQVIQ 295
           +      + YL SGELVA L   +  ++ +SL+Y + R+LP  VRAF  W   V+Q
Sbjct: 241 RVASYLARPYLRSGELVACLDNVSC-ALPLSLVYPQNRYLPPAVRAFYAWSKVVLQ 295