Pairwise Alignments

Query, 268 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

Subject, 481 a.a., OmpA/MotB domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 50.1 bits (118), Expect = 9e-11
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 8/141 (5%)

Query: 20  DVPGSHDLPLVPRLADAQIVDFRPTAELERIYPMGSIRKISGQLRFDGQVSARGKVTSVT 79
           D  GS D P++ RL  A I  ++     + +   G  +   GQ +     +  GKVT + 
Sbjct: 196 DTQGSKDHPMIARLPGAFIQKYQQQGYAQTLVFDGVEQ---GQHKIK---TLEGKVTDIG 249

Query: 80  YELPPEHSSTEAFTLAREALQKQGAELLFWCQARDCGESSLWANQVFGNAKLYGADDQQA 139
           Y+LP  +S  E     + AL+K G    F CQ   CG++ L   ++     + G D+ Q 
Sbjct: 250 YKLPRGYSEYEVDANYKAALEKLGFVRGFHCQGLACGKTDLIERRIKTLISI-GFDENQY 308

Query: 140 YLLLRLAAPQDNSLLALYSIT 160
           Y L RL  P D ++ A+  IT
Sbjct: 309 YSLYRLDRP-DGAVHAMVFIT 328



 Score = 35.8 bits (81), Expect = 2e-06
 Identities = 15/53 (28%), Positives = 29/53 (54%)

Query: 73  GKVTSVTYELPPEHSSTEAFTLAREALQKQGAELLFWCQARDCGESSLWANQV 125
           G++  V Y+LP  + ++ A    +  ++K G  +LF CQ + CG+    + Q+
Sbjct: 66  GQLKRVYYKLPSSYLASHAVNNYKAQIEKLGGTILFECQEKACGDDHKLSKQI 118