Pairwise Alignments

Query, 273 a.a., Flp pilus assembly protein CpaB from Pseudomonas fluorescens FW300-N2E3

Subject, 298 a.a., SAF domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 60.1 bits (144), Expect = 6e-14
 Identities = 51/225 (22%), Positives = 103/225 (45%), Gaps = 20/225 (8%)

Query: 8   LIGISLVMGLGAAWMANSWLSARLNASPDD------HLRSVVVATVEIPFGQMVEAQQVT 61
           L+ I+L++G  +AW   ++  A+     D+       +  V+VAT  +  G ++    ++
Sbjct: 12  LLVIALILGGISAWATKNYFIAKEQELRDELTKDNIAMADVIVATQPLKKGDIISQANMS 71

Query: 62  TVRMPMDTIPDDAFDSSDKAVGKIATFDILRGDIVRGARLSEHLGGSTLAS---LIAPDK 118
             ++  DT+P DA   S    G++A   +L+        +  +L G  +A    ++   +
Sbjct: 72  VRQIRADTLPLDAIHPS--RFGEVAGQMLLQPMAPGRPLIETYLPGMRVAQFSDILKEGQ 129

Query: 119 RAISVRVDDVVGVGGFLLPGNRVDVLATKQTNGSNNNAVS-RTILENLRVLAV------- 170
           RA+++ +D++    G L+P + +D+L + +  G N      + +LE++ VLA        
Sbjct: 130 RAVTIDIDEINSSAGMLVPSDHIDLLLSFKEEGRNGERKRLQLLLEDVTVLATGRRSIDV 189

Query: 171 -DQTAGTDKTQPVVVRAVTLEMTTTEAEALVTAQTEGKLQLALRN 214
             +   T    P     VTL ++  +A  +  A+ +G     LRN
Sbjct: 190 NPELVDTLYDNPNAYNTVTLALSVNDAARVSLAKQKGDFVTLLRN 234