Pairwise Alignments

Query, 270 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

Subject, 260 a.a., Outer membrane protein and related peptidoglycan-associated (lipo)proteins from Pseudomonas stutzeri RCH2

 Score =  145 bits (367), Expect = 7e-40
 Identities = 85/245 (34%), Positives = 131/245 (53%), Gaps = 11/245 (4%)

Query: 18  GLAGCAGQHSAAALQQASADFQKVKEDSNVLRIAPKDVIRAGESLARADRLSTYWGSGPD 77
           GL  CA Q +   L++A + F  ++ DS   ++A  +   A   L +A++          
Sbjct: 16  GLVACANQPNEN-LEEARSSFSALQSDSRASKVAALETQDASNMLDKANKAYLNDADRET 74

Query: 78  VKHYAYLSQRYSEIARQHTEQALNDERGAKLELERQRLQLALRENKLLSVQQQGKWLEEQ 137
           V   AYL++R  E+A Q       ++   K   +R   +L  R+ ++  +Q+        
Sbjct: 75  VDQLAYLTKRRIELAEQTIALRAAEDNLGKASAQRAEARLEARDAQIRKLQE-------- 126

Query: 138 IINLATTQTDRGLVMTLGDVLFDTGEAELKNSANRTVLKIVQFLQLNPKRVVRIEGYADN 197
             ++   QT+RG ++T GDVLFD   AELK    R+V K+  FL  N +R V +EGY D+
Sbjct: 127 --DMQAKQTERGTLVTFGDVLFDLDRAELKPGGMRSVQKLADFLNDNAERKVIVEGYTDS 184

Query: 198 TGGKQDNLKLSRDRAQSVADMLIDLGIEDKRIQVEGYGDEYPVEANASERGRAQNRRVEI 257
           TG  + N +LS  RA SV   L+ +G++ +RI  +GYG EYPV +N+   GRA NRRVE+
Sbjct: 185 TGSAEYNQRLSERRANSVRAALVKMGVDPQRIVSQGYGKEYPVASNSDSAGRAMNRRVEV 244

Query: 258 VFSDE 262
             SD+
Sbjct: 245 TISDD 249