Pairwise Alignments

Query, 1162 a.a., chromosome segregation protein SMC from Pseudomonas fluorescens FW300-N2E3

Subject, 1151 a.a., putative chromosome segregation protein SMC from Phaeobacter inhibens DSM 17395

 Score =  441 bits (1133), Expect = e-127
 Identities = 363/1196 (30%), Positives = 567/1196 (47%), Gaps = 82/1196 (6%)

Query: 1    VRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60
            +R   ++L GFKSFVDPT +     +  VVGPNGCGKSN+++A+RWVMGE+  K +RG  
Sbjct: 1    MRFSKLRLNGFKSFVDPTDLLIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKAMRGGG 60

Query: 61   MTDVIFNGSTSRKPVSQASIELVFDNSDGTLIGEYAAYAEISIRRKVTRDSQTTYYLNGT 120
            M DVIF G++SR   + A + L  DNS+      +     + I R++TRD  + Y  NG 
Sbjct: 61   MEDVIFAGTSSRPARNFAEVSLQIDNSERLAPSGFNESDNLEILRRITRDVGSAYKTNGK 120

Query: 121  KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIESKPEDLRNFIEEAAGISKYKERRRET 180
              R RD+  +F     G  S +++ QG I++LI +KP+  R  +EEAAGIS   +RR E 
Sbjct: 121  DVRARDVQMLFADASTGAHSPALVRQGQIAELINAKPKARRRILEEAAGISGLYQRRHEA 180

Query: 181  ENRIRRTHENLARLTDLRDELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQEL 240
            E +++ T +NL R+ D+ ++L  QL +L RQA+ A++Y++   + R+ +  L   RW+E 
Sbjct: 181  ELKLKNTEQNLLRVDDVIEQLAAQLSQLARQARHAQRYRDIGEQLRRAEGMLLYRRWREA 240

Query: 241  NEQVGQREAIIGNQE---ISFEALV----AEQRNADASIERLRDGHHDLSERFNLVQGRF 293
            ++   + E I+  +E      EAL      ++  A++++  LR+     +     +  + 
Sbjct: 241  DDARLEAEDILRTRETQAAKAEALARVADGKRLEAESALPPLREEEAIAAAVLQRLFVQR 300

Query: 294  YSVGGDIARVEQSIQHGQQRLRQLQDDLKEAERSRLETESHLGHDRTLLATLGEELDMLT 353
             ++    A+  Q+I+    R+ QL  D        +E ES L  D       GE ++ L 
Sbjct: 301  DALSDQEAQARQTIETLTNRVAQLGRD--------IERESGLNRD------AGETIERLD 346

Query: 354  PEQEVTSAAA----EEAAAALEESETTMHGWQEQWDSFNLRSAEPRRQAEVQQSRIQQLE 409
             EQ   + AA    +  A A E S       Q + +     + +  R A   QS  +Q+E
Sbjct: 347  WEQRELARAAIGHDDRMAEAAERSREAGSVLQAREEHLTSLTEDVARLAARHQSAQRQVE 406

Query: 410  TSMERLAERQRRLAEERDLLSAAPEDAAILDLSEQLAASEATLEDLQASEEAQVERLEQL 469
                 L   +      RD         A+++  + LA +EA  E    +EE      E  
Sbjct: 407  DCRRGLLRAEEEGGASRD---------AMVEAGDTLAQAEAAFEAAIEAEEEARAAAELA 457

Query: 470  RQELQLALQNQQQAQGDLQRLNGRLASLEALQQAALDPGTGAAEWLREQHLAERPRLAEG 529
             + L  A + +   Q        R +  E  +  AL     A   L E+  AE   + + 
Sbjct: 458  DEALAAADEARNDTQSREAEARARRSEAEG-ELGALRAEVTALAKLVERDTAEGGHVLDE 516

Query: 530  LKVEAGWELAVETVLGADLQAVL--VDDFAGFDLSGFAQGDLRLLSPASDGVRIPGSLLD 587
            ++V AG+E A+   L  DL+A L  VD  +G+       GD  L + A     +P SL  
Sbjct: 517  MRVAAGYEKALGAALADDLRAPLAEVDGPSGWVTLPPYDGDAPLPAGA-----VPLSL-- 569

Query: 588  KVEAQIDLSPWLGQVKPVDSLEQALSLRGQLSVGESLISRDG---YWVGRHFLRVRRASE 644
             V +   L   + QV  VD+ + A  L  +L  G+ L++ +G    W G        A +
Sbjct: 570  HVSSPDALHRRISQVGLVDA-DAARDLHSRLMPGQRLVTLEGDLWRWDGFR----AWAED 624

Query: 645  AESGMLARGQEIQRLGLEREERE----------ATVETLETTLQNLRAQQRQQENGREHL 694
            A S    R +++ RL + +++ E          A  E L   L  +    +     R   
Sbjct: 625  APSAAALRLEQMNRLEVLKQDMEHVGARADGAKAAHEVLMRKLAEVTTADQTARQARRVA 684

Query: 695  RRLLQDEARQQGELKAQLSAGKAKAEQLTLRRTRLDEELGELAEQRALEHEQIGESRLQL 754
             + + D AR     ++  +  + K E L++   R DE+    A+    E E   E    L
Sbjct: 685  DQRVADAARALSRAESHRNLSEGKLETLSIAVARHDED-AAAAQAHLTEAEAAVEGLEDL 743

Query: 755  QEALDSMAIDTEQRELLLAQRDSLRERLDRVRQEARQHKDHAHQLAVRLGSLKAQHDSTR 814
             EA   +    +  E       + R   D +R+E         Q+   L          R
Sbjct: 744  AEARAKVEDIKQAVEAARITMLTHRSTQDELRREGEARTARGQQVTKDL-------SGWR 796

Query: 815  QALERLELQSERLTEKREQLSLNLEEG-EAPL------EELRLKLEELLDKRMSVDEELR 867
              LE  + +   LTE+R      L+E  + P       EEL L +EE   ++    + L 
Sbjct: 797  HRLESADRRIAELTERRAATEEELQEAHQVPAEIAETHEELNLAIEEAEARKAVASDALI 856

Query: 868  TAQIALEDADRELRDAEKRRSQAEQQSQLIRGQLEQQRMEWQALTVRRKTLQDQLLEDGY 927
             A+  L DA +  R+  +  S+A +       + +  R E       R   + Q + D  
Sbjct: 857  GAETVLRDAVQNERECARLASEAREARARSEARCDAAR-EAVGHAEARIREEQQTVPDAL 915

Query: 928  DLQGVLATLVAEANEKDAEEELERIAARIQRLGAINLAAIDEYQQQSERKRYLDAQDADL 987
             L  + AT     N ++ E E+ R   +   LGA+NL A ++ +   +    L  + ADL
Sbjct: 916  -LASLDATPEDMPNAEELEAEVNRHKRQRDALGAVNLRAEEDARTVQDEHDQLVREKADL 974

Query: 988  VEALDTLENVIRKIDKETRNRFKDTFDQINGGLQALFPKVFGGGNAYLELT-GEDLLDTG 1046
             EA+ TL + I  +++E R R    F+++N     LF  +FGGG A L +   +D LD G
Sbjct: 975  EEAVKTLRSGIASLNREGRERLLTAFEEVNASFTMLFTHLFGGGEANLVMVESDDPLDAG 1034

Query: 1047 VTIMARPPGKKNSTIHLLSGGEKALTALALVFAIFKLNPAPFCMLDEVDAPLDDANVGRY 1106
            + IM +PPGKK ST+ LLSGGE+ LTA+AL+FA+F  NPAP C+LDEVDAPLDDANV R+
Sbjct: 1035 LEIMCQPPGKKLSTLSLLSGGEQTLTAMALIFAVFLSNPAPICVLDEVDAPLDDANVTRF 1094

Query: 1107 ARLVKEMSQ--TVQFIYITHNKIAMEMADQLMGVTMHEPGCSRLVAVDVEEAMAMV 1160
              L+ EM +    +F+ ITH+ + M   D+L GVTM E G S+LV+VD+++A A+V
Sbjct: 1095 CDLLDEMCRQTDTRFLIITHHAVTMARMDRLFGVTMQEKGVSQLVSVDLKKAEALV 1150