Pairwise Alignments

Query, 328 a.a., thiamine biosynthesis protein ApbE from Pseudomonas fluorescens FW300-N2E3

Subject, 338 a.a., thiamine biosynthesis lipoprotein apbE precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  148 bits (373), Expect = 2e-40
 Identities = 89/297 (29%), Positives = 153/297 (51%), Gaps = 17/297 (5%)

Query: 20  GPTMGSTYSVKYIRHPGTPGPVEVQKQVESILAEIDRQLSTYRSDSDIERFNGLPANSCQ 79
           G   G+ Y + Y +H       +++ ++E+ L   D+ LS +   S I R N    N   
Sbjct: 35  GFVFGTVYKIAY-QHDA-----DLKPEIEAELKRFDQSLSPFNDSSVISRVN---RNEEL 85

Query: 80  PMPAPVLQLVKVGEQLSETSAGSYDLTVEPLLNLWGFGPQSRDEKIPSAEALALARQRVG 139
              +          ++S  + G++D+T+ PL N WGFG   +    P +  +    Q  G
Sbjct: 86  VTDSFFQTCFNRSMEISRETKGAFDITIAPLANAWGFG--FKKGAFPDSLMIDSLLQITG 143

Query: 140 YTHLRIEGDQLCKDAP-VEVDFGSIGAGYAVDRIAAKLQEMGIDSFIADATGELKAVGKK 198
           Y  +++E  ++ K  P V +   ++  GY+VD IA  L   GI +++ D  GE+   GK 
Sbjct: 144 YEKVKLENGKVVKQDPRVMLSCSAVAKGYSVDVIARLLDRKGIKNYMVDIGGEVVVKGKN 203

Query: 199 LDGSPWKIALEEPRDD----QQVVERVIALDGNGVSTSGDYRNYFMQDGRRYSHTFDART 254
             G  W+I + +P DD    +Q ++ V+ L   G++TSG+YRNY+ +DG++Y+HT D RT
Sbjct: 204 ATGDLWRIGINKPYDDSLAVKQDIQVVLNLTDLGMATSGNYRNYYYKDGKKYAHTIDPRT 263

Query: 255 GAPITHTLASVTVINPSTLMADGLSTLLLILGPERGWDYAEKHD-IGAFFVIRADTG 310
           G P+ H++ S TVI    + AD L+T  +++  E    + + +  I A+F+   + G
Sbjct: 264 GYPVQHSILSSTVIAEDCMTADALATSFMVMELEEAEKFCKANPMIDAYFIYSGENG 320