Pairwise Alignments

Query, 948 a.a., Valyl-tRNA synthetase (EC 6.1.1.9) from Pseudomonas fluorescens FW300-N1B4

Subject, 958 a.a., valyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score = 1315 bits (3404), Expect = 0.0
 Identities = 633/958 (66%), Positives = 763/958 (79%), Gaps = 12/958 (1%)

Query: 1   MDKTYQPHAIETSWYNTWESENYFAPQGAGE--SYTIMIPPPNVTGSLHMGHGFNNAIMD 58
           M+KTY P +IE + Y  WE + YF P G     +Y IMIPPPNVTGSLHMGH F + IMD
Sbjct: 1   MEKTYDPQSIEQTLYQNWEEQGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMD 60

Query: 59  ALIRFRRMQGRNTLWQPGTDHAGIATQMLVERQLEAQ-GQNRHDLGREKFLEKVWEWKDQ 117
            LIR++RM+G+NTLWQ GTDHAGIATQMLVER+LEA+ G++RHDLGR+ F+EKVWEWK Q
Sbjct: 61  TLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLEAEEGKSRHDLGRDAFMEKVWEWKAQ 120

Query: 118 SGGNISRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLH 177
           SGG I++Q+RR+G+SVDW RERFTMD+GLS+AV+E FVRL+ED LIYRGKRLVNWD KLH
Sbjct: 121 SGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQEVFVRLYEDDLIYRGKRLVNWDPKLH 180

Query: 178 TAISDLEVENHDEKGFLWNLKYPLADGAKTAEGKDYLIVATTRPETMLGDAAVAVNPNDE 237
           TAISDLEVEN +++G +W+L+YPLADG  TA+GKDYL VATTRPETMLGD+AVAV+P+DE
Sbjct: 181 TAISDLEVENKEKQGHMWHLRYPLADGELTADGKDYLEVATTRPETMLGDSAVAVHPDDE 240

Query: 238 RYKALIGKFVELPLVGRRIPIIADDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNI 297
           RY+ALIGKF+ LP+V RRIPI+ADDY D EFGTGCVKITPAHDFNDYEVGKRH LP+ N+
Sbjct: 241 RYQALIGKFILLPIVNRRIPIVADDYVDMEFGTGCVKITPAHDFNDYEVGKRHKLPMFNV 300

Query: 298 FDKNADVLPAAQVFNLDGSVNEQIDGTLPAEYVGLNRFQARKEIVAAFEAAGLLVSVDDH 357
              +A +  +A+V N DG++N  +DG+LP  + GL+RF+AR  IVA FE  GLL  +  H
Sbjct: 301 LTLDAAIRASAEVVNTDGTINTSLDGSLPERFAGLDRFKARDAIVAEFETLGLLEKIAPH 360

Query: 358 ALKVPKGDRSGTIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRDI 417
            LKVP GDRSG +IEP LTDQWYV+  P+A+ AI AVE+G I+FVP+QYENMYFSWMRDI
Sbjct: 361 GLKVPYGDRSGVVIEPMLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRDI 420

Query: 418 QDWCISRQLWWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPDVALQQDNDVLDTWFSSG 477
           QDWCISRQLWWGHRIPAWYD +GKVYVGR+EAEVRAK+N+   +AL+QD DVLDTWFSS 
Sbjct: 421 QDWCISRQLWWGHRIPAWYDANGKVYVGRNEAEVRAKHNIDDAIALRQDEDVLDTWFSSA 480

Query: 478 LWTFSTLGWPEQTEFLKKFHSTDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKT 537
           LWTFSTLGWP+  E LK FH TDVLVTGFDIIFFWVARMIM+TMHL+K+EDG PQVPFKT
Sbjct: 481 LWTFSTLGWPDNVEDLKTFHPTDVLVTGFDIIFFWVARMIMMTMHLIKDEDGKPQVPFKT 540

Query: 538 VYVHGLVRDGQGQKMSKSKGNVLDPLDIIDGIELEELVQKRTSGMMQPKLAKKIEKQTRD 597
           VYV GL+RD  G KMSKSKGNVLDPLD+IDGI+LE LV+KRT  MMQP+LA KIEK TR 
Sbjct: 541 VYVTGLIRDEAGNKMSKSKGNVLDPLDMIDGIDLEALVEKRTGNMMQPQLAAKIEKSTRK 600

Query: 598 EFADGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAARYVL--DKGED 655
           EF +GI ++GTDALRFT  ++ASTGRDI +DM R++GYR+FCNK+WNA+RYVL   +G+D
Sbjct: 601 EFENGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKLWNASRYVLMNTEGQD 660

Query: 656 CGQNGEAY-----ELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDW 710
           CG N   Y     ELSLADRWII    +T       +  +RFDLAA  LYEF WNQ+CDW
Sbjct: 661 CGPNSPDYQGGEMELSLADRWIIGLFNQTVKTYDDHMTNYRFDLAANTLYEFTWNQFCDW 720

Query: 711 YLELSKPVLWDENAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRVAPLAGIEG 770
           YLEL+KPVL  +N    + RGTR TLV VLE   RL HP MP+ITE IWQRV PL G +G
Sbjct: 721 YLELTKPVL--QNGNEAQMRGTRHTLVNVLEAMQRLMHPMMPYITETIWQRVKPLTGAQG 778

Query: 771 KTIMLQPWPVANEARIDQGAEDDIEWLKGLMLGTRNIRGEMNIGPGKPLNLFLKNVSAED 830
            TIML P+P  + A++D  A  D+EW+K +++  RNIR E+NI P KPLN  L+ VSA+D
Sbjct: 779 DTIMLAPFPSYDAAKVDATAMADLEWVKQVIVAVRNIRAELNIAPSKPLNALLRGVSAQD 838

Query: 831 QRRLTENEALLKKLARLESITVLKAGEEAPLSATALVGEMEVLVPMAGLIDKDAELARLD 890
           Q R+  N+A    LARLES+T+L  GE AP+S T L+GEME+L+PMAGL+D  AE+AR+D
Sbjct: 839 QARVEANQAFFTTLARLESMTILGEGETAPMSTTGLIGEMELLIPMAGLVDVAAEMARID 898

Query: 891 KEILRLQGEVQRVGGKLSNAGFVDKAPAEVIEKERAKLAEAEQALGKLAEQHARIASL 948
           K++ +L  E+ R+ GKLSN GFV KAP  VI+KERAK+A+  + + KL EQ A  A L
Sbjct: 899 KQLEKLTQEIARIEGKLSNEGFVAKAPPAVIDKERAKMADLSRDMDKLKEQKAEFAKL 956