Pairwise Alignments

Query, 248 a.a., ABC transporter for L-asparagine and L-glutamate, permease component 1 (from data) from Pseudomonas fluorescens FW300-N1B4

Subject, 243 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  256 bits (653), Expect = 4e-73
 Identities = 125/241 (51%), Positives = 172/241 (71%), Gaps = 3/241 (1%)

Query: 1   MNYNWDWGVFFKSTGVGSEIYFDWYLSGLGWTIAIAVAAWIIALLLGSILGVMRTVPNRI 60
           MNY W+W +F++ +  G+  Y D  +SGL WT+A A+AAW +AL+LG ++G+MRT+P++ 
Sbjct: 1   MNYTWNWSIFWQLSPEGNGTYLDTLMSGLYWTMATALAAWALALVLGGMIGIMRTLPSKG 60

Query: 61  VSGIATCYVELFRNVPLLVQLFIWYFLVPDLLPADIQEWYKQDLNPTTSAFLSVVVCLGL 120
           +  +   YVE+FRN+PLLVQLF+WYF++P+LLP     W KQ  +   + F + VV +G 
Sbjct: 61  LQRLGAAYVEVFRNIPLLVQLFLWYFVLPELLPPSWGLWLKQIPD---APFYTSVVGIGC 117

Query: 121 FTTARVCEQVRTGIQALPRGQEAAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVF 180
           FT+ARV EQ+R GI  LPRGQ  A+ A+G  LPQ Y  +LLP A RI++PPLTSEFLN  
Sbjct: 118 FTSARVAEQIRAGITTLPRGQAMASTALGLTLPQTYRYILLPMALRIVLPPLTSEFLNTV 177

Query: 181 KNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRSVEKKVAVP 240
           KN+SVA  I LMEL A+T+   EFS  +FEAF  ATLIY  +N+ ++ +MR +E +VAVP
Sbjct: 178 KNTSVALTISLMELTARTRAMQEFSFQVFEAFAAATLIYVLINVVVVAVMRVIEHRVAVP 237

Query: 241 G 241
           G
Sbjct: 238 G 238