Pairwise Alignments

Query, 212 a.a., Endonuclease III (EC 4.2.99.18) from Pseudomonas fluorescens FW300-N1B4

Subject, 285 a.a., endonuclease III, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  157 bits (396), Expect = 2e-43
 Identities = 88/202 (43%), Positives = 121/202 (59%), Gaps = 4/202 (1%)

Query: 3   AAKRLEIFRRFHEDNPEPKTELAYSSPFELLIAVILSAQSTDVGVNKATAKLFPVANTPA 62
           A + L++ RR +   P P T L   +P+ELL+A +L+AQ TD  VNK T  LF +   PA
Sbjct: 10  ALQVLDLLRRRY---PTPATHLVARNPWELLVATVLAAQCTDERVNKVTPHLFALWPDPA 66

Query: 63  AIHALGVEGLSEYIKTIGLFNSKAKNVIETCRLLVERHGGEVPQTREALEALPGVGRKTA 122
           A+     E L E I + G + +KAKN++   R + E HGGEVP+T + L  LPGV RKTA
Sbjct: 67  ALACATQEALEEVIHSTGFYRNKAKNLLGAARRVTEVHGGEVPRTMDELVQLPGVARKTA 126

Query: 123 NVVLNTAFR-QLTMAVDTHIFRVSNRTGIAPGKNVVEVEQKLMKFVPKEYLLDAHHWLIL 181
           NVVL   F     +AVDTH+ R+ +R G+    + V VE+ LM+  P+E   D +H L+ 
Sbjct: 127 NVVLWGGFGVNEGIAVDTHVKRIVHRMGLTKETDPVAVERDLMRLYPREAWGDVNHMLVW 186

Query: 182 HGRYVCLARKPRCGSCRIEDLC 203
            GR+VC ARKP C  C +  +C
Sbjct: 187 FGRHVCDARKPLCEQCEMAGIC 208