Pairwise Alignments

Query, 368 a.a., FOG: GGDEF domain from Pseudomonas fluorescens FW300-N1B4

Subject, 376 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  400 bits (1029), Expect = e-116
 Identities = 213/366 (58%), Positives = 261/366 (71%), Gaps = 3/366 (0%)

Query: 5   AIQRLLLKRFALAAGTYALALLLLWLAFFTGHYDESIAGMAIGSALVVLSQAVLFAVFSS 64
           AIQ+L+ +RFA+A+ TY LAL+L W+   +G Y+ S A     SAL+V+SQ + F +F  
Sbjct: 12  AIQQLVTRRFAMASVTYGLALMLTWVVVASGFYEASTASAITHSALIVVSQLLFFWLFHR 71

Query: 65  GRNLRFSDPSLTEVQILLGLGWQTWLIAHLDEARGAFLVFYPLILLFGLFHLSRMAFARC 124
           G NLRF DPSLTE Q+L+ L W T+ + +L  ARG+ LV Y L+L+F +F L    F R 
Sbjct: 72  GINLRFKDPSLTEPQVLVALLWLTYFLFNLGSARGSLLVLYLLVLMFAVF-LQPKVFIRY 130

Query: 125 AFLVFFSFSAITLWEGYHFQLPDPTLALLQVCVLFVVLGWLVLYARYVQMSRQRMRQRRF 184
           A L F SF  +   + Y  +  D T+ LLQ  VL V L W+ L+A +V   RQRMRQRRF
Sbjct: 131 AALAFLSFVGLAALDYYLQRAVDSTVFLLQASVLLVTLIWMCLFAGHVYRLRQRMRQRRF 190

Query: 185 ALQAHQDTLRGMMRQLEGLVATDELTGLFNRRHFLRLASRELNAMETDVVHGLALIDLDH 244
           ALQAHQDTLRGMMRQLE L +TDELTGL+NRR FLR+A  EL+ +      GLALIDLDH
Sbjct: 191 ALQAHQDTLRGMMRQLEDLASTDELTGLYNRRRFLRIAEGELSRLRKGHQFGLALIDLDH 250

Query: 245 FKRINDVHGHAAGDQVLQAFAGVATACLRDGDVLARYGGEEFVVLLPDCDAERLTACCER 304
           FKR+ND+HGHAAGD+VLQ FA VA +CLRD DVLARYGGEEFV+LLPD DAE+ +ACCER
Sbjct: 251 FKRVNDIHGHAAGDRVLQTFASVARSCLRDADVLARYGGEEFVLLLPDTDAEQFSACCER 310

Query: 305 LRIAFMDVELVGLDVR--NLSLSVGMTLLALDDDLDDALHRADQALYRAKRDGRNRCAAA 362
           LR AF   E   +D+   +LSLS+G+TL+   DDLD AL RAD+ALYRAKR GRNRC  A
Sbjct: 311 LREAFSKAEPEEVDIAAGHLSLSIGLTLVNAGDDLDAALQRADEALYRAKRAGRNRCEPA 370

Query: 363 WENVDA 368
           W   DA
Sbjct: 371 WITSDA 376