Pairwise Alignments

Query, 368 a.a., FOG: GGDEF domain from Pseudomonas fluorescens FW300-N1B4

Subject, 367 a.a., GGDEF domain protein from Marinobacter adhaerens HP15

 Score =  124 bits (310), Expect = 5e-33
 Identities = 110/341 (32%), Positives = 157/341 (46%), Gaps = 42/341 (12%)

Query: 31  AFFTGHYDESIAGMAIGSALVVLSQAVLFAVFSSGRNLRFSDPSLTEVQILLGLGWQTWL 90
           A+F GH   S     + S + +++  +L+   S+G   R     +  V +L      T+L
Sbjct: 42  AWFAGH---STHAWVLWSFIGLIALNMLYFA-STGNRARQKAGMIVIVGLLF-----TYL 92

Query: 91  IAHLDEARGAFLVFYPLILLFGLFHLSRMAFARCAFLVFFSFSAITLWEGYHFQLPDPTL 150
           IA   E+    L FY    L  LF+L+ +       L  +  + +       FQ P   L
Sbjct: 93  IASGGESNTGPLWFYVFPPL--LFYLTDLKTGTAVLLFCYLVAVVV------FQFPGLPL 144

Query: 151 ALLQVCV-----LFVVLGWLVLYARYVQMSRQRMRQRRFAL-QAHQDTLRGMMRQLEGLV 204
              +  +      F  L +  ++   ++ SR + R     L + H+   R          
Sbjct: 145 VSAEYSMDFKIRFFAALTFESIFCFVLEASRLKARNELLTLAETHEHAAR---------- 194

Query: 205 ATDELTGLFNRRHFLRLASRELNAMETDVVH-GLALIDLDHFKRINDVHGHAAGDQVLQA 263
            TDELTGL NRR      + E +  +    H  +ALIDLD FK+IND  GH AGD VL+ 
Sbjct: 195 -TDELTGLANRRDMQNRLAMEFSRYQRSGHHFSIALIDLDLFKQINDQFGHDAGDDVLRE 253

Query: 264 FAGVATACLRDGDVLARYGGEEFVVLLPDCDAERLTACCERLRIAFMDVELVGLDVRN-- 321
           FAG+    +R  DV AR+GGEEF+VLLPD    +     ERLR    DV       R+  
Sbjct: 254 FAGLIRTVIRQADVAARWGGEEFLVLLPDTSLLQALTLAERLR---SDVSRHAFRFRDQA 310

Query: 322 --LSLSVGMTLLALDDDLDDALHRADQALYRAKRDGRNRCA 360
             +++S G+  +A    LDD L +AD  LY AK  GRNR A
Sbjct: 311 LPVTISAGVCSIAKARSLDDLLKQADLHLYNAKESGRNRIA 351