Pairwise Alignments

Query, 368 a.a., FOG: GGDEF domain from Pseudomonas fluorescens FW300-N1B4

Subject, 581 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  113 bits (283), Expect = 1e-29
 Identities = 66/179 (36%), Positives = 98/179 (54%), Gaps = 3/179 (1%)

Query: 191 DTLRGMMRQLEGLVATDELTGLFNRRHFLRLASR-ELNAMETDVVHGLALIDLDHFKRIN 249
           + ++    +L+   ATD LT LFNRRHF + A R  + A  T     + + D+D FKR+N
Sbjct: 395 EEIKASQEELKYQAATDSLTHLFNRRHFHKEAQRIYMQASVTQQPMAVIICDIDLFKRVN 454

Query: 250 DVHGHAAGDQVLQAFAGVATACLRDGDVLARYGGEEFVVLLPDCDAERLTACCERLRIAF 309
           D +GH  GDQV+   A       R  D++ARYGGEEF++LL D        C ER+R A 
Sbjct: 455 DKYGHLMGDQVIIDIATTLKQHARKCDIVARYGGEEFIMLLHDVSLTEAHQCAERIRSAV 514

Query: 310 MDVELVG--LDVRNLSLSVGMTLLALDDDLDDALHRADQALYRAKRDGRNRCAAAWENV 366
            ++  +    +   ++LS+G+  +     L+ A+  AD ALYRAK  GRN   ++  N+
Sbjct: 515 AELSFMAETQEAFTVTLSLGVAAVDFVHPLEHAIKLADDALYRAKHQGRNNVQSSEINL 573