Pairwise Alignments

Query, 911 a.a., Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

 Score = 1139 bits (2947), Expect = 0.0
 Identities = 574/913 (62%), Positives = 710/913 (77%), Gaps = 14/913 (1%)

Query: 1   MFAPLLKKLFGSKNEREVKRMLKTVQLVNAFEEQMVALSDDQLRAKTDEFKARLAKGETL 60
           M   LL K+ GS+N+R ++R+ K V+ +N +E    ALSD++L+AKT EF+ R+ +GE L
Sbjct: 1   MITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENL 60

Query: 61  DKLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGMIAEMRTGEGKTLVATLGVYLNA 120
           D+LLPEAFA  REA KRV GMRHFDVQLIGGM LH G IAEMRTGEGKTL ATL  YLNA
Sbjct: 61  DQLLPEAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNA 120

Query: 121 LSGRGVHVVTVNDYLARRDANWMRPLYEFLGMTVGVVTPFQPPEEKRAAYAADITYGTNN 180
           L G+GVH+VTVNDYLA+RDA   RPL+EFLGMTVGV  P  P   K+ AY ADI YGTNN
Sbjct: 121 LPGKGVHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNN 180

Query: 181 EFGFDYLRDNMAFSMEEKFQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSKLYIEIN 240
           EFGFDYLRDNMAF  E++ QR   FAV+DEVDSILIDEARTPLIISG AEDSS LYI IN
Sbjct: 181 EFGFDYLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRIN 240

Query: 241 KLIPQLELHVEEVEGEVTKAGHYTVDEKTRQVELNEAGHQFIEDMLTRVGLLAEGESLYS 300
           KLIP L+   +E   E    GH+TVDEK++QV L E G +F+E++L + G++ EG++LYS
Sbjct: 241 KLIPLLQKQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYS 300

Query: 301 AHNLGLLTHVYAGLRAHKLFNRNVEYIV-QDGQVVLVDEHTGRTMPGRRLSEGLHQAIEA 359
             N+ LL HV A LRAH LF +NV+YIV  DG+VV+VDEHTGRTMPGRR S+GLHQA+EA
Sbjct: 301 PANISLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEA 360

Query: 360 KEHLNIQAESQTLASTTFQNYFRLYNKLSGMTGTADTEAFEFHQIYGLQVMVIPPNKPLA 419
           KE + IQ E+QTLAS TFQNYFRLY KLSGMTGTADTEAFEF QIYGL+ +VIP NKP+ 
Sbjct: 361 KEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMV 420

Query: 420 RKDYNDLVFLTAEEKYAAIIGDIKECMAQGRPVLVGTATIETSEHMSSLLVKEGIEHKVL 479
           R D  D+V+ +  EK+AAII DIK+ + +G+PVLVGT +IE SE +S+ L K GI+H VL
Sbjct: 421 RNDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVL 480

Query: 480 NAKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGNWEVEVASLEDPTPEQIAQIKA 539
           NAKFHEKEAEI+A+AG+PGA+TIATNMAGRGTDI+LGG+W+ +V  L++PT EQI  IKA
Sbjct: 481 NAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEKLDNPTQEQIDAIKA 540

Query: 540 DWQKRHQQVLESGGLQVIASERHESRRIDNQLRGRAGRQGDAGSSRFYLSLEDSLMRIFA 599
           +W++ H QVL++GGL +I +ERHESRRIDNQLRGR+GRQGDAGSSRFYLS+ED+L+RIF 
Sbjct: 541 EWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIFT 600

Query: 600 SDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFDIRKQLLEFDDVNNEQRKVI 659
           SDR+   +++ GM  GEAIE +M++ +IEKAQRKVEGRNFDIRKQLLE+DDV N+QRKV+
Sbjct: 601 SDRMAALIQS-GMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVV 659

Query: 660 YHMRNSLLAADNIGETIADFRQDVLNATVSAHIPPQSLPEQWDVAGLEAALQSDFGVALP 719
           Y +R+ L++AD+I + IA  R+DVLNA +  +IPPQSL + WD+ GLE  L++DF + LP
Sbjct: 660 YELRDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDFDLPLP 719

Query: 720 IQQWLDEDDHLYEETLREKLMNELIAAYNEKEDQAGAEALRTFEKQIVLRVLDDLWKDHL 779
           IQ WLD D+ LYEE LRE+++ + +  Y  KE       +R FEK ++L+ LD LWK+HL
Sbjct: 720 IQSWLDADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDTLWKEHL 779

Query: 780 STMDHLRHGIHLRGYAQKNPKQEYKRESFTLFSELLDSIKRDSIRVLSHVQVRREDPIEE 839
           + MDHLR GIHLRGYAQKNPKQEYKRESF LF +LL+S+K D I VLS V+V++++ +E 
Sbjct: 780 AAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSKVRVQQQEEVER 839

Query: 840 -EARLRQEAEALAARMQFQHDEAPGLEQPEVLGEEVDVALATAP-VRNEQKLGRNELCYC 897
            EA+ R +AE  A   Q QH  A   EQ E          +  P VR+E+K+GRNE C C
Sbjct: 840 MEAQRRAQAEEAARHAQAQHASADDAEQDE----------SNQPMVRDERKVGRNEPCPC 889

Query: 898 GSGKKFKHCHGQI 910
           GSGKK+K CHGQI
Sbjct: 890 GSGKKYKQCHGQI 902