Pairwise Alignments

Query, 911 a.a., Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 896 a.a., preprotein translocase subunit SecA (RefSeq) from Rhodospirillum rubrum S1H

 Score =  927 bits (2397), Expect = 0.0
 Identities = 492/921 (53%), Positives = 634/921 (68%), Gaps = 41/921 (4%)

Query: 1   MFAPLLKKLFGSKNEREVKRMLKTVQLVNAFEEQMVALSDDQLRAKTDEFKARLAKGETL 60
           MF  + ++LFGS N+R VK ++KTV  +NA E ++  LSD  L A+T   K+RLA+GETL
Sbjct: 1   MFGAIARRLFGSANDRIVKSLVKTVAAINAKESEVQGLSDADLAARTPWLKSRLAEGETL 60

Query: 61  DKLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGMIAEMRTGEGKTLVATLGVYLNA 120
           D +L +AFA  REA KR +G RH+DVQL+GG+ LH G IAEMRTGEGKTLVATL VYLNA
Sbjct: 61  DDILVDAFATVREAAKRTLGQRHYDVQLMGGLVLHGGKIAEMRTGEGKTLVATLPVYLNA 120

Query: 121 LSGRGVHVVTVNDYLARRDANWMRPLYEFLGMTVGVVTPFQPPEEKRAAYAADITYGTNN 180
           L+G+GVHVVTVNDYLA+RDA WM  +Y FLG+TVGV+        +RAAYA D+TYGTNN
Sbjct: 121 LTGKGVHVVTVNDYLAKRDAEWMAKVYRFLGLTVGVIIHELDDGGRRAAYACDVTYGTNN 180

Query: 181 EFGFDYLRDNMAFSMEEKFQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSKLYIEIN 240
           E GFD+LRDNM + +E+  QR   +A++DEVDSILIDEARTPLIISGQAEDSS LY  ++
Sbjct: 181 ELGFDFLRDNMKYRLEDMVQRPFAYAIVDEVDSILIDEARTPLIISGQAEDSSALYQAVD 240

Query: 241 KLIPQLELHVEEVEGEVTKAGHYTVDEKTRQVELNEAGHQFIEDMLTRVGLLAEGESLYS 300
           KL+P+L                Y  DEK R V   E G   IE++L   GLLAEG +LY 
Sbjct: 241 KLMPRL------------VPADYEKDEKARSVTYTEEGSDHIEELLREAGLLAEG-NLYE 287

Query: 301 AHNLGLLTHVYAGLRAHKLFNRNVEYIVQDGQVVLVDEHTGRTMPGRRLSEGLHQAIEAK 360
             N+  L H   GLRAH LF R+V Y+V+D +VV++DE TGR M GRR S+GLHQA+EAK
Sbjct: 288 TRNVTALHHATQGLRAHTLFERDVHYMVRDDKVVIIDEFTGRAMEGRRFSDGLHQALEAK 347

Query: 361 EHLNIQAESQTLASTTFQNYFRLYNKLSGMTGTADTEAFEFHQIYGLQVMVIPPNKPLAR 420
           E ++IQ E+QTLAS TFQNYFR+Y KLSGMTGTA TEA EF +IYGL V+ IP N+P+ R
Sbjct: 348 EGVSIQPENQTLASITFQNYFRMYPKLSGMTGTALTEANEFMEIYGLAVVEIPTNRPMIR 407

Query: 421 KDYNDLVFLTAEEKYAAIIGDIKECMAQGRPVLVGTATIETSEHMSSLL-VKEGIEHKVL 479
           KD +D V+ T+ EKY AI   I EC  +G+PVLVGT +IE SE+++ L+     ++ +VL
Sbjct: 408 KDKDDEVYRTSREKYEAIAKQIAECQKRGQPVLVGTTSIEKSEYLAELMRTTTKVKPQVL 467

Query: 480 NAKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGNWEVEVAS--LEDPTPEQ---- 533
           NA++HE+EA IIAQAG PGA+TIATNMAGRGTDI LGGN ++ +A     D TPEQ    
Sbjct: 468 NARYHEQEAFIIAQAGVPGAVTIATNMAGRGTDIQLGGNLDMRMARELPADATPEQRAAK 527

Query: 534 IAQIKADWQKRHQQVLESGGLQVIASERHESRRIDNQLRGRAGRQGDAGSSRFYLSLEDS 593
            A+++AD +K+  Q L +GGL VI +ERHESRRIDNQLRGR GRQGD G S FYLSL+D 
Sbjct: 528 EAELRADIEKKKAQALAAGGLYVIGTERHESRRIDNQLRGRTGRQGDPGGSSFYLSLDDD 587

Query: 594 LMRIFASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFDIRKQLLEFDDVNN 653
           LMRIF S+R+ + ++ LG++ GEAI H  V  A+EKAQ+KVE RNFD RK LL+FDDV N
Sbjct: 588 LMRIFGSERMDSMLRKLGLEEGEAIVHPWVNKALEKAQQKVEARNFDTRKNLLKFDDVMN 647

Query: 654 EQRKVIYHMRNSLLAADNIGETIADFRQDVLNATVSAHIPPQSLPEQWDVAGLEAALQSD 713
           +QRKV+Y  R  L+   ++ ET+AD RQ+V+   V AHIPP+++PE+WD AGL   ++  
Sbjct: 648 DQRKVVYEQRRDLMVTTDVSETVADMRQEVIEDIVHAHIPPKAMPEEWDSAGLAEDVRRV 707

Query: 714 FGVALPIQQWLDEDDHLYEETLREKLMNELIAAYNEKEDQAGAEALRTFEKQIVLRVLDD 773
           FG+ LPI  W  ED    EE L E+L  ++ A    KE + GA+ +R  EK ++L++LD 
Sbjct: 708 FGLDLPIIDWASEDGIANEEIL-ERLTKDVEAKMAAKEAEYGADVMRMVEKSLLLQILDG 766

Query: 774 LWKDHLSTMDHLRHGIHLRGYAQKNPKQEYKRESFTLFSELLDSIKRDSIRVLSHVQVRR 833
           +WK+HL  ++HLR GI LR + Q++P  EYK ESF +F  +L  ++      L++VQ+R 
Sbjct: 767 MWKEHLLHLEHLRQGISLRAFGQRDPLNEYKSESFEMFQTMLSDLRERVTMTLANVQLRM 826

Query: 834 EDPIEEEARLRQEAEALAARMQFQHDEAPGLEQPEVLGEEVDVALATAPVRNE------Q 887
           + P         E +  A  ++          +P + G  V      A  R         
Sbjct: 827 DPPPPP-----PEPQGFAEHVE---------PEPAIGGGGVPGVAPAATDREAGHPETWG 872

Query: 888 KLGRNELCYCGSGKKFKHCHG 908
           K+ RNELC CGSGKK+KHCHG
Sbjct: 873 KVARNELCPCGSGKKYKHCHG 893