Pairwise Alignments

Query, 911 a.a., Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 907 a.a., preprotein translocase subunit SecA (RefSeq) from Shewanella loihica PV-4

 Score = 1145 bits (2961), Expect = 0.0
 Identities = 575/911 (63%), Positives = 709/911 (77%), Gaps = 6/911 (0%)

Query: 1   MFAPLLKKLFGSKNEREVKRMLKTVQLVNAFEEQMVALSDDQLRAKTDEFKARLAKGETL 60
           MF  LL K+FGS+N+R +K + K V  +NA E      SD++L+AKT EFK RL  G+TL
Sbjct: 1   MFGKLLTKIFGSRNDRTLKTLGKIVTKINALEADFEKFSDEELKAKTAEFKQRLESGQTL 60

Query: 61  DKLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGMIAEMRTGEGKTLVATLGVYLNA 120
           D ++PEAFAV REA KRV  MRHFDVQL+GGM L    IAEMRTGEGKTL ATL  YLNA
Sbjct: 61  DDVMPEAFAVVREASKRVFEMRHFDVQLLGGMVLDSNRIAEMRTGEGKTLTATLPAYLNA 120

Query: 121 LSGRGVHVVTVNDYLARRDANWMRPLYEFLGMTVGVVTPFQPPEEKRAAYAADITYGTNN 180
           L+G+GVHV+TVNDYLARRDA   RPL+EFLGMTVGV        EK+ AYA+DITYGTNN
Sbjct: 121 LTGKGVHVITVNDYLARRDAENNRPLFEFLGMTVGVNIAGMGQAEKKMAYASDITYGTNN 180

Query: 181 EFGFDYLRDNMAFSMEEKFQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSKLYIEIN 240
           EFGFDYLRDNMAFS  E+ QR L++A+IDEVDSILIDEARTPLIISG AEDSS+LYI+IN
Sbjct: 181 EFGFDYLRDNMAFSPNERVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKIN 240

Query: 241 KLIPQLELHVEEVEGEVTKAGHYTVDEKTRQVELNEAGHQFIEDMLTRVGLLAEGESLYS 300
            LIP L    +E   E    G Y++DEK +QV + E G + +E +LT  G+LAEG+SLYS
Sbjct: 241 TLIPHLIRQDKEDTEEEIGDGDYSIDEKAKQVHMTERGQEKVEVLLTERGMLAEGDSLYS 300

Query: 301 AHNLGLLTHVYAGLRAHKLFNRNVEYIVQDGQVVLVDEHTGRTMPGRRLSEGLHQAIEAK 360
           A N+ LL HV A LRAH LF ++V+YIVQD +V++VDEHTGRTMPGRR SEGLHQA+EAK
Sbjct: 301 AANISLLHHVNAALRAHTLFEKDVDYIVQDNEVIIVDEHTGRTMPGRRWSEGLHQAVEAK 360

Query: 361 EHLNIQAESQTLASTTFQNYFRLYNKLSGMTGTADTEAFEFHQIYGLQVMVIPPNKPLAR 420
           E ++IQ E+QTLAS TFQN+FR Y KL+GMTGTADTEAFEF  IYGL  +VIP N+P+ R
Sbjct: 361 EGVHIQNENQTLASITFQNFFRQYEKLAGMTGTADTEAFEFQHIYGLDTVVIPTNRPMVR 420

Query: 421 KDYNDLVFLTAEEKYAAIIGDIKECMAQGRPVLVGTATIETSEHMSSLLVKEGIEHKVLN 480
           KD+ DLV+LTAEEKY AII DI +C  +G+PVLVGT +IE SE + S+L K  I H+VLN
Sbjct: 421 KDHADLVYLTAEEKYDAIIKDIIDCRDRGQPVLVGTVSIEQSELLHSMLKKAKIPHEVLN 480

Query: 481 AKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGNWEVEVASLEDPTPEQIAQIKAD 540
           AKFHE+EAEI+AQAGR GA+TIATNMAGRGTDI+LGGNW +E+ +LE+PT EQ A+IKAD
Sbjct: 481 AKFHEREAEIVAQAGRSGAVTIATNMAGRGTDIVLGGNWNMEIDALENPTAEQKAKIKAD 540

Query: 541 WQKRHQQVLESGGLQVIASERHESRRIDNQLRGRAGRQGDAGSSRFYLSLEDSLMRIFAS 600
           WQ RH +V+ +GGL ++ +ERHESRRIDNQLRGR+GRQGDAGSSRFYLS+EDSLMRIFAS
Sbjct: 541 WQVRHDEVVAAGGLHILGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDSLMRIFAS 600

Query: 601 DRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFDIRKQLLEFDDVNNEQRKVIY 660
           +RV + MK LGM+ GEAIEH  V+ AIE AQRKVE RNFDIRKQLLEFDDV N+QR+V+Y
Sbjct: 601 ERVSSMMKKLGMEKGEAIEHPWVSRAIENAQRKVEARNFDIRKQLLEFDDVANDQRQVVY 660

Query: 661 HMRNSLLAADNIGETIADFRQDVLNATVSAHIPPQSLPEQWDVAGLEAALQSDFGVALPI 720
             RN L+ A++I +TI + + DV+N  +  +IPPQS+ E WD+AGLE  L+ ++ + +P+
Sbjct: 661 AQRNELMDAESIQDTIVNIQADVVNGLIDQYIPPQSVEELWDIAGLETRLEQEYALRMPV 720

Query: 721 QQWLDEDDHLYEETLREKLMNELIAAYNEKEDQAGAEALRTFEKQIVLRVLDDLWKDHLS 780
           Q+WLD++D L+EETLRE+++   + AY  KE+  GA+ LR FEK ++L+ LD LWK+HL+
Sbjct: 721 QEWLDKEDDLHEETLRERIVEIWVKAYKAKEEMVGAQVLRQFEKAVMLQTLDGLWKEHLA 780

Query: 781 TMDHLRHGIHLRGYAQKNPKQEYKRESFTLFSELLDSIKRDSIRVLSHVQVRREDPIEEE 840
            MDHLR GIHLRGYAQKNPKQEYKRESF LF ++L+S+K D I +LS VQV+ +  +EE 
Sbjct: 781 AMDHLRQGIHLRGYAQKNPKQEYKRESFELFQQMLESLKHDVISILSKVQVQAQSDVEEM 840

Query: 841 ARLRQEAEALAARMQFQHDEAPGLEQPEVLGEEVDVALATAP-VRNEQKLGRNELCYCGS 899
              R++ EA   R  +QH EA  L    V  EE     AT P VR  +K+GRN+ C CGS
Sbjct: 841 EERRRQEEA-KVRRDYQHAEAEAL----VGAEEAQALAATQPVVREGEKVGRNDPCPCGS 895

Query: 900 GKKFKHCHGQI 910
           G+K+K CHG++
Sbjct: 896 GRKYKQCHGKL 906